Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA4AP68366 ABALON-201ENST00000629058 1903 ntBASIC17.91■□□□□ 0.46
TUBA4AP68366 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA4AP68366 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA4AP68366 KRT17P1-201ENST00000399211 1546 ntBASIC17.91■□□□□ 0.46
TUBA4AP68366 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
TUBA4AP68366 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA4AP68366 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA4AP68366 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA4AP68366 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA4AP68366 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TUBA4AP68366 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA4AP68366 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.9■□□□□ 0.46
TUBA4AP68366 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.9■□□□□ 0.46
TUBA4AP68366 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA4AP68366 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA4AP68366 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA4AP68366 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA4AP68366 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.9■□□□□ 0.46
TUBA4AP68366 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA4AP68366 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TUBA4AP68366 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA4AP68366 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBA4AP68366 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
TUBA4AP68366 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBA4AP68366 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TUBA4AP68366 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
TUBA4AP68366 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA4AP68366 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA4AP68366 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
TUBA4AP68366 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.9■□□□□ 0.46
TUBA4AP68366 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA4AP68366 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA4AP68366 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TUBA4AP68366 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TUBA4AP68366 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.9■□□□□ 0.46
TUBA4AP68366 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
TUBA4AP68366 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.89■□□□□ 0.45
TUBA4AP68366 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
TUBA4AP68366 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TUBA4AP68366 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA4AP68366 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA4AP68366 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.89■□□□□ 0.45
TUBA4AP68366 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA4AP68366 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TUBA4AP68366 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
TUBA4AP68366 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.89■□□□□ 0.45
TUBA4AP68366 MCRIP2P1-201ENST00000394346 511 ntBASIC17.89■□□□□ 0.45
TUBA4AP68366 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.89■□□□□ 0.45
TUBA4AP68366 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.89■□□□□ 0.45
TUBA4AP68366 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
TUBA4AP68366 CYP2T3P-201ENST00000601990 817 ntBASIC17.89■□□□□ 0.45
TUBA4AP68366 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
TUBA4AP68366 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.89■□□□□ 0.45
TUBA4AP68366 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
TUBA4AP68366 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.89■□□□□ 0.45
TUBA4AP68366 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA4AP68366 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA4AP68366 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA4AP68366 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.89■□□□□ 0.45
TUBA4AP68366 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA4AP68366 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA4AP68366 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA4AP68366 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.89■□□□□ 0.45
TUBA4AP68366 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA4AP68366 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA4AP68366 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA4AP68366 AC090340.1-201ENST00000620778 4980 ntBASIC17.89■□□□□ 0.45
TUBA4AP68366 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TUBA4AP68366 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBA4AP68366 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.89■□□□□ 0.45
TUBA4AP68366 AC141586.3-201ENST00000562166 1838 ntBASIC17.88■□□□□ 0.45
TUBA4AP68366 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TUBA4AP68366 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TUBA4AP68366 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
TUBA4AP68366 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.88■□□□□ 0.45
TUBA4AP68366 AP001271.2-201ENST00000624018 1556 ntBASIC17.88■□□□□ 0.45
TUBA4AP68366 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.88■□□□□ 0.45
TUBA4AP68366 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TUBA4AP68366 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TUBA4AP68366 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TUBA4AP68366 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.88■□□□□ 0.45
TUBA4AP68366 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TUBA4AP68366 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.88■□□□□ 0.45
TUBA4AP68366 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.88■□□□□ 0.45
TUBA4AP68366 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBA4AP68366 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBA4AP68366 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBA4AP68366 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TUBA4AP68366 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TUBA4AP68366 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBA4AP68366 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TUBA4AP68366 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBA4AP68366 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TUBA4AP68366 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.88■□□□□ 0.45
TUBA4AP68366 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBA4AP68366 FP475955.4-201ENST00000623131 1990 ntBASIC17.88■□□□□ 0.45
TUBA4AP68366 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBA4AP68366 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBA4AP68366 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms