Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.47■□□□□ 0.39
CDC42P60953 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42P60953 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42P60953 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42P60953 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42P60953 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42P60953 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42P60953 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42P60953 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42P60953 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42P60953 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42P60953 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42P60953 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.47■□□□□ 0.39
CDC42P60953 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.47■□□□□ 0.39
CDC42P60953 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42P60953 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42P60953 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.47■□□□□ 0.39
CDC42P60953 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42P60953 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CDC42P60953 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.47■□□□□ 0.39
CDC42P60953 SDHAP1-207ENST00000440850 2000 ntBASIC17.47■□□□□ 0.39
CDC42P60953 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDC42P60953 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42P60953 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDC42P60953 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42P60953 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42P60953 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CDC42P60953 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42P60953 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.46■□□□□ 0.39
CDC42P60953 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDC42P60953 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42P60953 AC104417.2-201ENST00000562989 1793 ntBASIC17.46■□□□□ 0.39
CDC42P60953 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42P60953 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42P60953 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42P60953 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDC42P60953 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42P60953 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42P60953 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42P60953 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42P60953 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CDC42P60953 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.46■□□□□ 0.39
CDC42P60953 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42P60953 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.46■□□□□ 0.39
CDC42P60953 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.46■□□□□ 0.39
CDC42P60953 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42P60953 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42P60953 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42P60953 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
CDC42P60953 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.46■□□□□ 0.39
CDC42P60953 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.46■□□□□ 0.39
CDC42P60953 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42P60953 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CDC42P60953 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDC42P60953 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDC42P60953 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDC42P60953 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42P60953 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDC42P60953 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDC42P60953 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
CDC42P60953 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDC42P60953 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42P60953 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.45■□□□□ 0.38
CDC42P60953 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.45■□□□□ 0.38
CDC42P60953 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42P60953 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC42P60953 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42P60953 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42P60953 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDC42P60953 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC42P60953 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42P60953 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42P60953 ZNRF2P3-201ENST00000424200 374 ntBASIC17.45■□□□□ 0.38
CDC42P60953 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC42P60953 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC42P60953 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC42P60953 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42P60953 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC42P60953 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42P60953 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC42P60953 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC42P60953 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.45■□□□□ 0.38
CDC42P60953 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42P60953 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42P60953 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDC42P60953 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.44■□□□□ 0.38
CDC42P60953 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC42P60953 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CDC42P60953 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC42P60953 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDC42P60953 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC42P60953 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC42P60953 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC42P60953 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDC42P60953 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.44■□□□□ 0.38
CDC42P60953 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.44■□□□□ 0.38
CDC42P60953 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC42P60953 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC42P60953 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.44■□□□□ 0.38
CDC42P60953 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms