Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
SUMO3P55854 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.33■□□□□ 0.37
SUMO3P55854 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SUMO3P55854 BX323043.1-201ENST00000641006 1765 ntBASIC17.33■□□□□ 0.37
SUMO3P55854 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUMO3P55854 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUMO3P55854 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.33■□□□□ 0.36
SUMO3P55854 TSPY7P-201ENST00000431358 1114 ntBASIC17.33■□□□□ 0.36
SUMO3P55854 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUMO3P55854 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SUMO3P55854 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUMO3P55854 AC093827.2-201ENST00000512654 315 ntBASIC17.33■□□□□ 0.36
SUMO3P55854 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.33■□□□□ 0.36
SUMO3P55854 MIR4497-201ENST00000583208 89 ntBASIC17.33■□□□□ 0.36
SUMO3P55854 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUMO3P55854 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.33■□□□□ 0.36
SUMO3P55854 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.33■□□□□ 0.36
SUMO3P55854 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
SUMO3P55854 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SUMO3P55854 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUMO3P55854 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUMO3P55854 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SUMO3P55854 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUMO3P55854 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUMO3P55854 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUMO3P55854 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.33■□□□□ 0.36
SUMO3P55854 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.32■□□□□ 0.36
SUMO3P55854 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUMO3P55854 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUMO3P55854 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUMO3P55854 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.32■□□□□ 0.36
SUMO3P55854 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUMO3P55854 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SUMO3P55854 AL161938.1-201ENST00000569833 2180 ntBASIC17.32■□□□□ 0.36
SUMO3P55854 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SUMO3P55854 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SUMO3P55854 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUMO3P55854 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SUMO3P55854 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.32■□□□□ 0.36
SUMO3P55854 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.32■□□□□ 0.36
SUMO3P55854 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SUMO3P55854 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SUMO3P55854 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.32■□□□□ 0.36
SUMO3P55854 AP005242.2-201ENST00000580065 1175 ntBASIC17.32■□□□□ 0.36
SUMO3P55854 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.32■□□□□ 0.36
SUMO3P55854 AC066615.1-201ENST00000640911 628 ntBASIC17.32■□□□□ 0.36
SUMO3P55854 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.32■□□□□ 0.36
SUMO3P55854 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
SUMO3P55854 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SUMO3P55854 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUMO3P55854 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.32■□□□□ 0.36
SUMO3P55854 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SUMO3P55854 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SUMO3P55854 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUMO3P55854 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.32■□□□□ 0.36
SUMO3P55854 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SUMO3P55854 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUMO3P55854 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SUMO3P55854 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUMO3P55854 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUMO3P55854 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SUMO3P55854 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SUMO3P55854 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUMO3P55854 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SUMO3P55854 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SUMO3P55854 UNC93B2-201ENST00000285383 730 ntBASIC17.31■□□□□ 0.36
SUMO3P55854 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUMO3P55854 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
SUMO3P55854 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SUMO3P55854 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SUMO3P55854 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SUMO3P55854 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUMO3P55854 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.31■□□□□ 0.36
SUMO3P55854 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.31■□□□□ 0.36
SUMO3P55854 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.31■□□□□ 0.36
SUMO3P55854 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SUMO3P55854 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SUMO3P55854 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.31■□□□□ 0.36
SUMO3P55854 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.31■□□□□ 0.36
SUMO3P55854 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SUMO3P55854 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUMO3P55854 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.31■□□□□ 0.36
SUMO3P55854 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SUMO3P55854 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SUMO3P55854 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.31■□□□□ 0.36
SUMO3P55854 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.31■□□□□ 0.36
SUMO3P55854 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SUMO3P55854 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SUMO3P55854 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUMO3P55854 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SUMO3P55854 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.3■□□□□ 0.36
SUMO3P55854 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SUMO3P55854 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.3■□□□□ 0.36
SUMO3P55854 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.3■□□□□ 0.36
SUMO3P55854 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUMO3P55854 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUMO3P55854 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUMO3P55854 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUMO3P55854 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SUMO3P55854 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms