Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.98■□□□□ 0.79
EPHB3P54753 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EPHB3P54753 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.98■□□□□ 0.79
EPHB3P54753 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.98■□□□□ 0.79
EPHB3P54753 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.98■□□□□ 0.79
EPHB3P54753 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.98■□□□□ 0.79
EPHB3P54753 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EPHB3P54753 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
EPHB3P54753 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EPHB3P54753 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
EPHB3P54753 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
EPHB3P54753 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
EPHB3P54753 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.97■□□□□ 0.79
EPHB3P54753 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.97■□□□□ 0.79
EPHB3P54753 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.97■□□□□ 0.79
EPHB3P54753 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.97■□□□□ 0.79
EPHB3P54753 AC008622.2-201ENST00000617006 1229 ntBASIC19.97■□□□□ 0.79
EPHB3P54753 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
EPHB3P54753 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
EPHB3P54753 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.97■□□□□ 0.79
EPHB3P54753 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.97■□□□□ 0.79
EPHB3P54753 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
EPHB3P54753 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
EPHB3P54753 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
EPHB3P54753 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
EPHB3P54753 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.97■□□□□ 0.79
EPHB3P54753 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
EPHB3P54753 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
EPHB3P54753 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.97■□□□□ 0.79
EPHB3P54753 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EPHB3P54753 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.96■□□□□ 0.79
EPHB3P54753 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
EPHB3P54753 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
EPHB3P54753 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
EPHB3P54753 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EPHB3P54753 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EPHB3P54753 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
EPHB3P54753 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EPHB3P54753 UPK3BP1-201ENST00000428678 509 ntBASIC19.96■□□□□ 0.79
EPHB3P54753 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.96■□□□□ 0.79
EPHB3P54753 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.96■□□□□ 0.79
EPHB3P54753 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.96■□□□□ 0.79
EPHB3P54753 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EPHB3P54753 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EPHB3P54753 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
EPHB3P54753 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.96■□□□□ 0.79
EPHB3P54753 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.96■□□□□ 0.79
EPHB3P54753 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
EPHB3P54753 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.95■□□□□ 0.78
EPHB3P54753 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB3P54753 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB3P54753 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.95■□□□□ 0.78
EPHB3P54753 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.95■□□□□ 0.78
EPHB3P54753 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB3P54753 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.95■□□□□ 0.78
EPHB3P54753 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.95■□□□□ 0.78
EPHB3P54753 AL671277.2-201ENST00000458060 996 ntBASIC19.95■□□□□ 0.78
EPHB3P54753 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.95■□□□□ 0.78
EPHB3P54753 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB3P54753 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.95■□□□□ 0.78
EPHB3P54753 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.95■□□□□ 0.78
EPHB3P54753 MIR4674-201ENST00000582457 87 ntBASIC19.95■□□□□ 0.78
EPHB3P54753 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.95■□□□□ 0.78
EPHB3P54753 AL121956.5-201ENST00000625261 221 ntBASIC19.95■□□□□ 0.78
EPHB3P54753 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB3P54753 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.95■□□□□ 0.78
EPHB3P54753 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.95■□□□□ 0.78
EPHB3P54753 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.95■□□□□ 0.78
EPHB3P54753 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.95■□□□□ 0.78
EPHB3P54753 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB3P54753 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.95■□□□□ 0.78
EPHB3P54753 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EPHB3P54753 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB3P54753 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB3P54753 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB3P54753 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB3P54753 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB3P54753 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.94■□□□□ 0.78
EPHB3P54753 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
EPHB3P54753 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.94■□□□□ 0.78
EPHB3P54753 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.94■□□□□ 0.78
EPHB3P54753 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.94■□□□□ 0.78
EPHB3P54753 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB3P54753 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.94■□□□□ 0.78
EPHB3P54753 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB3P54753 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB3P54753 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.94■□□□□ 0.78
EPHB3P54753 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.94■□□□□ 0.78
EPHB3P54753 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.94■□□□□ 0.78
EPHB3P54753 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHB3P54753 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB3P54753 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB3P54753 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.93■□□□□ 0.78
EPHB3P54753 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
EPHB3P54753 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB3P54753 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHB3P54753 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.93■□□□□ 0.78
EPHB3P54753 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.93■□□□□ 0.78
EPHB3P54753 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.93■□□□□ 0.78
EPHB3P54753 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms