Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PMS1P54277 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.05■□□□□ 0.96
PMS1P54277 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.05■□□□□ 0.96
PMS1P54277 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.05■□□□□ 0.96
PMS1P54277 AC093525.10-201ENST00000625130 1569 ntBASIC21.05■□□□□ 0.96
PMS1P54277 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PMS1P54277 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.05■□□□□ 0.96
PMS1P54277 AC009113.1-201ENST00000570267 2443 ntBASIC21.05■□□□□ 0.96
PMS1P54277 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PMS1P54277 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.05■□□□□ 0.96
PMS1P54277 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PMS1P54277 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PMS1P54277 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PMS1P54277 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
PMS1P54277 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PMS1P54277 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.04■□□□□ 0.96
PMS1P54277 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PMS1P54277 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PMS1P54277 KRT16P5-201ENST00000455284 522 ntBASIC21.04■□□□□ 0.96
PMS1P54277 AC133681.1-201ENST00000465482 601 ntBASIC21.04■□□□□ 0.96
PMS1P54277 Z85996.1-201ENST00000494644 937 ntBASIC21.04■□□□□ 0.96
PMS1P54277 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.04■□□□□ 0.96
PMS1P54277 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.04■□□□□ 0.96
PMS1P54277 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.04■□□□□ 0.96
PMS1P54277 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PMS1P54277 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PMS1P54277 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PMS1P54277 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PMS1P54277 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PMS1P54277 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PMS1P54277 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.03■□□□□ 0.96
PMS1P54277 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PMS1P54277 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PMS1P54277 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PMS1P54277 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.03■□□□□ 0.96
PMS1P54277 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.03■□□□□ 0.96
PMS1P54277 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.03■□□□□ 0.96
PMS1P54277 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PMS1P54277 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PMS1P54277 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.03■□□□□ 0.96
PMS1P54277 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.03■□□□□ 0.96
PMS1P54277 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PMS1P54277 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.03■□□□□ 0.96
PMS1P54277 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PMS1P54277 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.03■□□□□ 0.96
PMS1P54277 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.03■□□□□ 0.96
PMS1P54277 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PMS1P54277 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PMS1P54277 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PMS1P54277 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.02■□□□□ 0.96
PMS1P54277 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.02■□□□□ 0.96
PMS1P54277 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PMS1P54277 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.02■□□□□ 0.96
PMS1P54277 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.02■□□□□ 0.96
PMS1P54277 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
PMS1P54277 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PMS1P54277 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PMS1P54277 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PMS1P54277 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.02■□□□□ 0.96
PMS1P54277 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PMS1P54277 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.02■□□□□ 0.96
PMS1P54277 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.02■□□□□ 0.96
PMS1P54277 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.02■□□□□ 0.96
PMS1P54277 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.02■□□□□ 0.96
PMS1P54277 AC128676.1-201ENST00000454392 318 ntBASIC21.02■□□□□ 0.96
PMS1P54277 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PMS1P54277 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.02■□□□□ 0.96
PMS1P54277 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
PMS1P54277 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PMS1P54277 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.02■□□□□ 0.96
PMS1P54277 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.02■□□□□ 0.96
PMS1P54277 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.02■□□□□ 0.96
PMS1P54277 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
PMS1P54277 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PMS1P54277 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.02■□□□□ 0.96
PMS1P54277 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.02■□□□□ 0.96
PMS1P54277 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PMS1P54277 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PMS1P54277 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PMS1P54277 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PMS1P54277 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.02■□□□□ 0.95
PMS1P54277 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
PMS1P54277 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PMS1P54277 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PMS1P54277 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PMS1P54277 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PMS1P54277 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PMS1P54277 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PMS1P54277 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
PMS1P54277 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PMS1P54277 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PMS1P54277 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PMS1P54277 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PMS1P54277 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
PMS1P54277 CD99P1-205ENST00000527459 561 ntBASIC21.01■□□□□ 0.95
PMS1P54277 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.01■□□□□ 0.95
PMS1P54277 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.01■□□□□ 0.95
PMS1P54277 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.01■□□□□ 0.95
PMS1P54277 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PMS1P54277 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms