Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.9■□□□□ 0.46
SMSP52788 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMSP52788 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SMSP52788 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMSP52788 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.9■□□□□ 0.46
SMSP52788 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.9■□□□□ 0.46
SMSP52788 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMSP52788 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMSP52788 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMSP52788 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMSP52788 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
SMSP52788 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMSP52788 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SMSP52788 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SMSP52788 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMSP52788 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.89■□□□□ 0.45
SMSP52788 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMSP52788 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMSP52788 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SMSP52788 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMSP52788 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMSP52788 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SMSP52788 RCN1P1-201ENST00000400413 996 ntBASIC17.89■□□□□ 0.45
SMSP52788 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMSP52788 TMPOP1-202ENST00000424642 1267 ntBASIC17.89■□□□□ 0.45
SMSP52788 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.89■□□□□ 0.45
SMSP52788 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMSP52788 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.89■□□□□ 0.45
SMSP52788 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.89■□□□□ 0.45
SMSP52788 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMSP52788 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
SMSP52788 HTR7P1-201ENST00000538670 1336 ntBASIC17.89■□□□□ 0.45
SMSP52788 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMSP52788 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMSP52788 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.89■□□□□ 0.45
SMSP52788 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.89■□□□□ 0.45
SMSP52788 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMSP52788 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMSP52788 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
SMSP52788 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.89■□□□□ 0.45
SMSP52788 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMSP52788 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.89■□□□□ 0.45
SMSP52788 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMSP52788 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMSP52788 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMSP52788 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMSP52788 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMSP52788 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMSP52788 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMSP52788 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMSP52788 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMSP52788 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMSP52788 HLA-G-202ENST00000376815 851 ntBASIC17.88■□□□□ 0.45
SMSP52788 HLA-G-203ENST00000376818 1127 ntBASIC17.88■□□□□ 0.45
SMSP52788 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.88■□□□□ 0.45
SMSP52788 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMSP52788 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.88■□□□□ 0.45
SMSP52788 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMSP52788 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SMSP52788 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.88■□□□□ 0.45
SMSP52788 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.88■□□□□ 0.45
SMSP52788 AF186192.3-201ENST00000583427 947 ntBASIC17.88■□□□□ 0.45
SMSP52788 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SMSP52788 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.88■□□□□ 0.45
SMSP52788 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SMSP52788 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.88■□□□□ 0.45
SMSP52788 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMSP52788 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SMSP52788 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SMSP52788 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMSP52788 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMSP52788 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMSP52788 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.88■□□□□ 0.45
SMSP52788 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SMSP52788 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SMSP52788 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SMSP52788 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SMSP52788 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.87■□□□□ 0.45
SMSP52788 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SMSP52788 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SMSP52788 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SMSP52788 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMSP52788 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMSP52788 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMSP52788 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SMSP52788 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMSP52788 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.87■□□□□ 0.45
SMSP52788 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SMSP52788 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.87■□□□□ 0.45
SMSP52788 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.87■□□□□ 0.45
SMSP52788 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
SMSP52788 NBPF21P-201ENST00000425093 1451 ntBASIC17.87■□□□□ 0.45
SMSP52788 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SMSP52788 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SMSP52788 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMSP52788 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMSP52788 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.87■□□□□ 0.45
SMSP52788 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMSP52788 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMSP52788 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms