Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.94■□□□□ 0.3
SRP9P49458 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.94■□□□□ 0.3
SRP9P49458 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP9P49458 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SRP9P49458 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP9P49458 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SRP9P49458 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SRP9P49458 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
SRP9P49458 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SRP9P49458 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP9P49458 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP9P49458 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP9P49458 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP9P49458 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP9P49458 UNC93B4-201ENST00000505679 747 ntBASIC16.94■□□□□ 0.3
SRP9P49458 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SRP9P49458 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.94■□□□□ 0.3
SRP9P49458 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.94■□□□□ 0.3
SRP9P49458 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP9P49458 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP9P49458 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.94■□□□□ 0.3
SRP9P49458 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP9P49458 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP9P49458 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.94■□□□□ 0.3
SRP9P49458 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SRP9P49458 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP9P49458 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SRP9P49458 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP9P49458 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP9P49458 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP9P49458 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP9P49458 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SRP9P49458 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP9P49458 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP9P49458 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SRP9P49458 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SRP9P49458 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP9P49458 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP9P49458 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP9P49458 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SRP9P49458 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.93■□□□□ 0.3
SRP9P49458 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
SRP9P49458 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.93■□□□□ 0.3
SRP9P49458 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SRP9P49458 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.93■□□□□ 0.3
SRP9P49458 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.93■□□□□ 0.3
SRP9P49458 AP003097.1-201ENST00000530657 1135 ntBASIC16.93■□□□□ 0.3
SRP9P49458 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.93■□□□□ 0.3
SRP9P49458 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SRP9P49458 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRP9P49458 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.93■□□□□ 0.3
SRP9P49458 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.93■□□□□ 0.3
SRP9P49458 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SRP9P49458 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SRP9P49458 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SRP9P49458 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.93■□□□□ 0.3
SRP9P49458 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRP9P49458 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRP9P49458 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRP9P49458 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRP9P49458 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRP9P49458 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.92■□□□□ 0.3
SRP9P49458 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRP9P49458 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRP9P49458 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.92■□□□□ 0.3
SRP9P49458 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.92■□□□□ 0.3
SRP9P49458 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.92■□□□□ 0.3
SRP9P49458 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SRP9P49458 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.92■□□□□ 0.3
SRP9P49458 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRP9P49458 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SRP9P49458 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRP9P49458 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRP9P49458 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRP9P49458 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRP9P49458 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRP9P49458 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRP9P49458 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SRP9P49458 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SRP9P49458 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.91■□□□□ 0.3
SRP9P49458 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRP9P49458 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRP9P49458 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRP9P49458 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRP9P49458 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRP9P49458 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRP9P49458 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRP9P49458 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.91■□□□□ 0.3
SRP9P49458 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRP9P49458 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRP9P49458 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.91■□□□□ 0.3
SRP9P49458 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRP9P49458 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.91■□□□□ 0.3
SRP9P49458 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SRP9P49458 AC026366.1-201ENST00000488803 879 ntBASIC16.91■□□□□ 0.3
SRP9P49458 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.91■□□□□ 0.3
SRP9P49458 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.91■□□□□ 0.3
SRP9P49458 AC008687.6-201ENST00000596318 630 ntBASIC16.91■□□□□ 0.3
SRP9P49458 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.91■□□□□ 0.3
SRP9P49458 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms