Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CR1P49238 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.8■□□□□ 0.28
CX3CR1P49238 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.8■□□□□ 0.28
CX3CR1P49238 AC020763.4-201ENST00000623414 4170 ntBASIC16.8■□□□□ 0.28
CX3CR1P49238 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CR1P49238 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.8■□□□□ 0.28
CX3CR1P49238 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.8■□□□□ 0.28
CX3CR1P49238 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.8■□□□□ 0.28
CX3CR1P49238 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CR1P49238 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CX3CR1P49238 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.8■□□□□ 0.28
CX3CR1P49238 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CR1P49238 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CR1P49238 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CX3CR1P49238 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
CX3CR1P49238 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.8■□□□□ 0.28
CX3CR1P49238 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.8■□□□□ 0.28
CX3CR1P49238 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CX3CR1P49238 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CR1P49238 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.8■□□□□ 0.28
CX3CR1P49238 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CR1P49238 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CR1P49238 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CR1P49238 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CR1P49238 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CR1P49238 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CR1P49238 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CX3CR1P49238 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CR1P49238 NBPF21P-201ENST00000425093 1451 ntBASIC16.8■□□□□ 0.28
CX3CR1P49238 LETM1P2-201ENST00000597330 2178 ntBASIC16.79■□□□□ 0.28
CX3CR1P49238 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CR1P49238 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CX3CR1P49238 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CR1P49238 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.79■□□□□ 0.28
CX3CR1P49238 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CR1P49238 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CX3CR1P49238 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CX3CR1P49238 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CR1P49238 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
CX3CR1P49238 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.79■□□□□ 0.28
CX3CR1P49238 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CR1P49238 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CR1P49238 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CR1P49238 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CR1P49238 KRT17P3-201ENST00000420566 1262 ntBASIC16.79■□□□□ 0.28
CX3CR1P49238 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CR1P49238 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.79■□□□□ 0.28
CX3CR1P49238 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.79■□□□□ 0.28
CX3CR1P49238 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.79■□□□□ 0.28
CX3CR1P49238 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.79■□□□□ 0.28
CX3CR1P49238 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CR1P49238 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.79■□□□□ 0.28
CX3CR1P49238 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CR1P49238 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CR1P49238 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CR1P49238 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CR1P49238 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CR1P49238 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CR1P49238 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CR1P49238 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CX3CR1P49238 AC026471.1-201ENST00000564629 3026 ntBASIC16.79■□□□□ 0.28
CX3CR1P49238 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CX3CR1P49238 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CR1P49238 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.79■□□□□ 0.28
CX3CR1P49238 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CR1P49238 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CR1P49238 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.79■□□□□ 0.28
CX3CR1P49238 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CX3CR1P49238 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
CX3CR1P49238 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CX3CR1P49238 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CX3CR1P49238 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.78■□□□□ 0.28
CX3CR1P49238 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.78■□□□□ 0.28
CX3CR1P49238 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CX3CR1P49238 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CX3CR1P49238 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CX3CR1P49238 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CX3CR1P49238 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CX3CR1P49238 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CX3CR1P49238 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CX3CR1P49238 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CX3CR1P49238 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CX3CR1P49238 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CX3CR1P49238 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CX3CR1P49238 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.78■□□□□ 0.28
CX3CR1P49238 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.78■□□□□ 0.28
CX3CR1P49238 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CX3CR1P49238 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.78■□□□□ 0.28
CX3CR1P49238 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CX3CR1P49238 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.78■□□□□ 0.28
CX3CR1P49238 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.78■□□□□ 0.28
CX3CR1P49238 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CX3CR1P49238 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CX3CR1P49238 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CX3CR1P49238 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CX3CR1P49238 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CX3CR1P49238 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CX3CR1P49238 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CX3CR1P49238 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CX3CR1P49238 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms