Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.53■□□□□ 0.56
KRT6CP48668 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT6CP48668 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.53■□□□□ 0.56
KRT6CP48668 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.53■□□□□ 0.56
KRT6CP48668 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT6CP48668 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6CP48668 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6CP48668 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT6CP48668 AC004264.1-201ENST00000608354 794 ntBASIC18.53■□□□□ 0.56
KRT6CP48668 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6CP48668 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
KRT6CP48668 AC090340.1-201ENST00000620778 4980 ntBASIC18.53■□□□□ 0.56
KRT6CP48668 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
KRT6CP48668 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT6CP48668 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
KRT6CP48668 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6CP48668 AC006333.2-201ENST00000607957 2099 ntBASIC18.53■□□□□ 0.56
KRT6CP48668 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6CP48668 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
KRT6CP48668 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6CP48668 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT6CP48668 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.52■□□□□ 0.56
KRT6CP48668 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT6CP48668 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT6CP48668 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT6CP48668 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT6CP48668 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT6CP48668 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.52■□□□□ 0.56
KRT6CP48668 IRX1P1-201ENST00000438849 1838 ntBASIC18.52■□□□□ 0.56
KRT6CP48668 KRT17P3-201ENST00000420566 1262 ntBASIC18.52■□□□□ 0.56
KRT6CP48668 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.52■□□□□ 0.56
KRT6CP48668 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT6CP48668 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT6CP48668 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
KRT6CP48668 RNA5SP413-201ENST00000516373 109 ntBASIC18.52■□□□□ 0.56
KRT6CP48668 AP003097.1-201ENST00000530657 1135 ntBASIC18.52■□□□□ 0.56
KRT6CP48668 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.52■□□□□ 0.56
KRT6CP48668 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.52■□□□□ 0.56
KRT6CP48668 AC008403.3-201ENST00000598924 454 ntBASIC18.52■□□□□ 0.56
KRT6CP48668 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.52■□□□□ 0.56
KRT6CP48668 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT6CP48668 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.52■□□□□ 0.56
KRT6CP48668 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT6CP48668 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.52■□□□□ 0.56
KRT6CP48668 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
KRT6CP48668 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
KRT6CP48668 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KRT6CP48668 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
KRT6CP48668 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
KRT6CP48668 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6CP48668 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
KRT6CP48668 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT6CP48668 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT6CP48668 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6CP48668 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6CP48668 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
KRT6CP48668 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6CP48668 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.51■□□□□ 0.55
KRT6CP48668 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6CP48668 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT6CP48668 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6CP48668 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6CP48668 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6CP48668 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT6CP48668 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6CP48668 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT6CP48668 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6CP48668 ID1-201ENST00000376105 1233 ntBASIC18.51■□□□□ 0.55
KRT6CP48668 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
KRT6CP48668 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6CP48668 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT6CP48668 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.51■□□□□ 0.55
KRT6CP48668 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT6CP48668 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
KRT6CP48668 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6CP48668 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6CP48668 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6CP48668 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6CP48668 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
KRT6CP48668 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6CP48668 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6CP48668 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.51■□□□□ 0.55
KRT6CP48668 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
KRT6CP48668 CROCCP3-202ENST00000420820 1947 ntBASIC18.51■□□□□ 0.55
KRT6CP48668 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT6CP48668 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT6CP48668 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT6CP48668 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT6CP48668 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT6CP48668 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KRT6CP48668 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
KRT6CP48668 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
KRT6CP48668 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT6CP48668 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT6CP48668 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.5■□□□□ 0.55
KRT6CP48668 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT6CP48668 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT6CP48668 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.5■□□□□ 0.55
KRT6CP48668 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.5■□□□□ 0.55
KRT6CP48668 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms