Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX5P45973 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX5P45973 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.45■□□□□ 0.22
CBX5P45973 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.45■□□□□ 0.22
CBX5P45973 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX5P45973 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX5P45973 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
CBX5P45973 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBX5P45973 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
CBX5P45973 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBX5P45973 AC012313.1-201ENST00000593393 3059 ntBASIC16.44■□□□□ 0.22
CBX5P45973 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CBX5P45973 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CBX5P45973 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CBX5P45973 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBX5P45973 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.44■□□□□ 0.22
CBX5P45973 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CBX5P45973 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.44■□□□□ 0.22
CBX5P45973 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBX5P45973 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CBX5P45973 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.44■□□□□ 0.22
CBX5P45973 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBX5P45973 RARRES2P4-201ENST00000514074 484 ntBASIC16.44■□□□□ 0.22
CBX5P45973 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.44■□□□□ 0.22
CBX5P45973 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.44■□□□□ 0.22
CBX5P45973 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBX5P45973 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.44■□□□□ 0.22
CBX5P45973 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CBX5P45973 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CBX5P45973 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBX5P45973 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CBX5P45973 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CBX5P45973 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.44■□□□□ 0.22
CBX5P45973 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CBX5P45973 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.44■□□□□ 0.22
CBX5P45973 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
CBX5P45973 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBX5P45973 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CBX5P45973 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX5P45973 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
CBX5P45973 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX5P45973 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX5P45973 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX5P45973 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.43■□□□□ 0.22
CBX5P45973 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.43■□□□□ 0.22
CBX5P45973 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CBX5P45973 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CBX5P45973 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX5P45973 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX5P45973 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX5P45973 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CBX5P45973 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX5P45973 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX5P45973 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CBX5P45973 AC005837.3-201ENST00000612163 286 ntBASIC16.43■□□□□ 0.22
CBX5P45973 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX5P45973 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CBX5P45973 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CBX5P45973 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX5P45973 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.43■□□□□ 0.22
CBX5P45973 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CBX5P45973 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBX5P45973 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CBX5P45973 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.42■□□□□ 0.22
CBX5P45973 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CBX5P45973 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.42■□□□□ 0.22
CBX5P45973 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX5P45973 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CBX5P45973 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CBX5P45973 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CBX5P45973 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.42■□□□□ 0.22
CBX5P45973 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX5P45973 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.42■□□□□ 0.22
CBX5P45973 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.42■□□□□ 0.22
CBX5P45973 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX5P45973 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
CBX5P45973 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CBX5P45973 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CBX5P45973 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.42■□□□□ 0.22
CBX5P45973 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CBX5P45973 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CBX5P45973 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CBX5P45973 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX5P45973 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CBX5P45973 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.42■□□□□ 0.22
CBX5P45973 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CBX5P45973 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CBX5P45973 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX5P45973 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CBX5P45973 TEX21P-204ENST00000641479 1693 ntBASIC16.42■□□□□ 0.22
CBX5P45973 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX5P45973 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX5P45973 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.42■□□□□ 0.22
CBX5P45973 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CBX5P45973 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.42■□□□□ 0.22
CBX5P45973 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.42■□□□□ 0.22
CBX5P45973 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CBX5P45973 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CBX5P45973 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.42■□□□□ 0.22
CBX5P45973 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms