Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CTSKP43235 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CTSKP43235 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
CTSKP43235 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.03■□□□□ 0.64
CTSKP43235 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.02■□□□□ 0.64
CTSKP43235 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTSKP43235 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.02■□□□□ 0.64
CTSKP43235 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.02■□□□□ 0.64
CTSKP43235 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.02■□□□□ 0.64
CTSKP43235 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.02■□□□□ 0.64
CTSKP43235 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.02■□□□□ 0.64
CTSKP43235 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTSKP43235 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.02■□□□□ 0.64
CTSKP43235 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.02■□□□□ 0.64
CTSKP43235 AL031432.5-201ENST00000641059 760 ntBASIC19.02■□□□□ 0.64
CTSKP43235 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTSKP43235 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CTSKP43235 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CTSKP43235 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTSKP43235 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTSKP43235 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.02■□□□□ 0.63
CTSKP43235 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTSKP43235 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CTSKP43235 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.01■□□□□ 0.63
CTSKP43235 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTSKP43235 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTSKP43235 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTSKP43235 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.01■□□□□ 0.63
CTSKP43235 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.01■□□□□ 0.63
CTSKP43235 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTSKP43235 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
CTSKP43235 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.01■□□□□ 0.63
CTSKP43235 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CTSKP43235 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.01■□□□□ 0.63
CTSKP43235 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.01■□□□□ 0.63
CTSKP43235 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.01■□□□□ 0.63
CTSKP43235 AP000550.4-202ENST00000639755 178 ntBASIC19.01■□□□□ 0.63
CTSKP43235 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CTSKP43235 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTSKP43235 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTSKP43235 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTSKP43235 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19■□□□□ 0.63
CTSKP43235 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CTSKP43235 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTSKP43235 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CTSKP43235 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CTSKP43235 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CTSKP43235 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CTSKP43235 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTSKP43235 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTSKP43235 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTSKP43235 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTSKP43235 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19■□□□□ 0.63
CTSKP43235 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19■□□□□ 0.63
CTSKP43235 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19■□□□□ 0.63
CTSKP43235 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19■□□□□ 0.63
CTSKP43235 CKBP1-201ENST00000565489 1086 ntBASIC19■□□□□ 0.63
CTSKP43235 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CTSKP43235 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19■□□□□ 0.63
CTSKP43235 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CTSKP43235 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
CTSKP43235 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19■□□□□ 0.63
CTSKP43235 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTSKP43235 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19■□□□□ 0.63
CTSKP43235 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTSKP43235 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CTSKP43235 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTSKP43235 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19■□□□□ 0.63
CTSKP43235 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTSKP43235 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19■□□□□ 0.63
CTSKP43235 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19■□□□□ 0.63
CTSKP43235 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTSKP43235 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CTSKP43235 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTSKP43235 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.99■□□□□ 0.63
CTSKP43235 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTSKP43235 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTSKP43235 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTSKP43235 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTSKP43235 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTSKP43235 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.99■□□□□ 0.63
CTSKP43235 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.99■□□□□ 0.63
CTSKP43235 HOMER2P1-201ENST00000455653 964 ntBASIC18.99■□□□□ 0.63
CTSKP43235 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.99■□□□□ 0.63
CTSKP43235 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTSKP43235 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.99■□□□□ 0.63
CTSKP43235 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.99■□□□□ 0.63
CTSKP43235 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTSKP43235 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.99■□□□□ 0.63
CTSKP43235 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.99■□□□□ 0.63
CTSKP43235 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.99■□□□□ 0.63
CTSKP43235 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.99■□□□□ 0.63
CTSKP43235 AL121956.5-201ENST00000625261 221 ntBASIC18.99■□□□□ 0.63
CTSKP43235 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CTSKP43235 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTSKP43235 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTSKP43235 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.99■□□□□ 0.63
CTSKP43235 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CTSKP43235 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTSKP43235 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms