Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.79■□□□□ 0.92
USP8P40818 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.79■□□□□ 0.92
USP8P40818 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.79■□□□□ 0.92
USP8P40818 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.79■□□□□ 0.92
USP8P40818 MIR4651-201ENST00000582622 73 ntBASIC20.79■□□□□ 0.92
USP8P40818 AC006058.3-201ENST00000606217 1069 ntBASIC20.79■□□□□ 0.92
USP8P40818 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.79■□□□□ 0.92
USP8P40818 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP8P40818 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.79■□□□□ 0.92
USP8P40818 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.79■□□□□ 0.92
USP8P40818 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.79■□□□□ 0.92
USP8P40818 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP8P40818 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.79■□□□□ 0.92
USP8P40818 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.78■□□□□ 0.92
USP8P40818 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
USP8P40818 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP8P40818 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP8P40818 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP8P40818 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP8P40818 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP8P40818 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP8P40818 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP8P40818 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.78■□□□□ 0.92
USP8P40818 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP8P40818 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP8P40818 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
USP8P40818 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP8P40818 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP8P40818 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.78■□□□□ 0.92
USP8P40818 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.78■□□□□ 0.92
USP8P40818 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.78■□□□□ 0.92
USP8P40818 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.78■□□□□ 0.92
USP8P40818 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.78■□□□□ 0.92
USP8P40818 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
USP8P40818 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
USP8P40818 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP8P40818 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
USP8P40818 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP8P40818 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP8P40818 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP8P40818 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP8P40818 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP8P40818 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP8P40818 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP8P40818 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.78■□□□□ 0.92
USP8P40818 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
USP8P40818 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP8P40818 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP8P40818 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP8P40818 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP8P40818 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.77■□□□□ 0.92
USP8P40818 KRASP1-201ENST00000407852 552 ntBASIC20.77■□□□□ 0.92
USP8P40818 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
USP8P40818 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP8P40818 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.77■□□□□ 0.92
USP8P40818 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.77■□□□□ 0.92
USP8P40818 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP8P40818 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
USP8P40818 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP8P40818 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
USP8P40818 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP8P40818 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
USP8P40818 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.77■□□□□ 0.91
USP8P40818 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
USP8P40818 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
USP8P40818 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.76■□□□□ 0.91
USP8P40818 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 AC239809.2-201ENST00000415381 517 ntBASIC20.76■□□□□ 0.91
USP8P40818 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
USP8P40818 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.76■□□□□ 0.91
USP8P40818 AC073648.6-201ENST00000641589 218 ntBASIC20.76■□□□□ 0.91
USP8P40818 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 SDHAP1-207ENST00000440850 2000 ntBASIC20.76■□□□□ 0.91
USP8P40818 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.76■□□□□ 0.91
USP8P40818 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.76■□□□□ 0.91
USP8P40818 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.76■□□□□ 0.91
USP8P40818 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.76■□□□□ 0.91
USP8P40818 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.76■□□□□ 0.91
USP8P40818 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP8P40818 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms