Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RORAP35398 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.16■□□□□ 0.5
RORAP35398 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
RORAP35398 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.16■□□□□ 0.5
RORAP35398 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RORAP35398 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RORAP35398 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RORAP35398 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RORAP35398 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RORAP35398 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RORAP35398 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RORAP35398 TSPY17P-201ENST00000450329 467 ntBASIC18.16■□□□□ 0.5
RORAP35398 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RORAP35398 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
RORAP35398 AL353719.1-201ENST00000566847 864 ntBASIC18.16■□□□□ 0.5
RORAP35398 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RORAP35398 AL138966.2-201ENST00000621997 464 ntBASIC18.16■□□□□ 0.5
RORAP35398 AC007952.6-201ENST00000573168 2673 ntBASIC18.16■□□□□ 0.5
RORAP35398 AC003957.1-201ENST00000625108 2673 ntBASIC18.16■□□□□ 0.5
RORAP35398 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RORAP35398 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
RORAP35398 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RORAP35398 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RORAP35398 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RORAP35398 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RORAP35398 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.15■□□□□ 0.5
RORAP35398 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.15■□□□□ 0.5
RORAP35398 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RORAP35398 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.15■□□□□ 0.5
RORAP35398 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.15■□□□□ 0.5
RORAP35398 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.15■□□□□ 0.5
RORAP35398 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RORAP35398 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RORAP35398 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RORAP35398 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.15■□□□□ 0.5
RORAP35398 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.15■□□□□ 0.5
RORAP35398 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RORAP35398 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RORAP35398 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.15■□□□□ 0.5
RORAP35398 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.15■□□□□ 0.5
RORAP35398 BX664615.1-201ENST00000443558 458 ntBASIC18.15■□□□□ 0.5
RORAP35398 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RORAP35398 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RORAP35398 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.15■□□□□ 0.5
RORAP35398 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.15■□□□□ 0.5
RORAP35398 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
RORAP35398 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.15■□□□□ 0.5
RORAP35398 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RORAP35398 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.15■□□□□ 0.5
RORAP35398 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RORAP35398 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RORAP35398 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RORAP35398 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RORAP35398 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RORAP35398 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RORAP35398 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.14■□□□□ 0.49
RORAP35398 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RORAP35398 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RORAP35398 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RORAP35398 ARMC10P1-201ENST00000313754 855 ntBASIC18.14■□□□□ 0.49
RORAP35398 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RORAP35398 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RORAP35398 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.14■□□□□ 0.49
RORAP35398 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.14■□□□□ 0.49
RORAP35398 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RORAP35398 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RORAP35398 PRSS44-201ENST00000515154 1146 ntBASIC18.14■□□□□ 0.49
RORAP35398 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.14■□□□□ 0.49
RORAP35398 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RORAP35398 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.14■□□□□ 0.49
RORAP35398 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.14■□□□□ 0.49
RORAP35398 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.14■□□□□ 0.49
RORAP35398 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RORAP35398 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.14■□□□□ 0.49
RORAP35398 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RORAP35398 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RORAP35398 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RORAP35398 AC104417.2-201ENST00000562989 1793 ntBASIC18.14■□□□□ 0.49
RORAP35398 KRT8P11-201ENST00000409686 1436 ntBASIC18.14■□□□□ 0.49
RORAP35398 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.14■□□□□ 0.49
RORAP35398 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RORAP35398 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RORAP35398 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.13■□□□□ 0.49
RORAP35398 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RORAP35398 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RORAP35398 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RORAP35398 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.13■□□□□ 0.49
RORAP35398 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RORAP35398 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RORAP35398 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RORAP35398 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RORAP35398 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.13■□□□□ 0.49
RORAP35398 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RORAP35398 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RORAP35398 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
RORAP35398 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.13■□□□□ 0.49
RORAP35398 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RORAP35398 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RORAP35398 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RORAP35398 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms