Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN3P26045 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPN3P26045 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
PTPN3P26045 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN3P26045 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN3P26045 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN3P26045 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN3P26045 AC093503.3-201ENST00000624917 2352 ntBASIC19.5■□□□□ 0.71
PTPN3P26045 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN3P26045 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN3P26045 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
PTPN3P26045 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.5■□□□□ 0.71
PTPN3P26045 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN3P26045 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.5■□□□□ 0.71
PTPN3P26045 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN3P26045 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN3P26045 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN3P26045 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.5■□□□□ 0.71
PTPN3P26045 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PTPN3P26045 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.5■□□□□ 0.71
PTPN3P26045 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN3P26045 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN3P26045 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.5■□□□□ 0.71
PTPN3P26045 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.5■□□□□ 0.71
PTPN3P26045 GCSHP5-201ENST00000443090 522 ntBASIC19.5■□□□□ 0.71
PTPN3P26045 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN3P26045 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.5■□□□□ 0.71
PTPN3P26045 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.5■□□□□ 0.71
PTPN3P26045 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.5■□□□□ 0.71
PTPN3P26045 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.5■□□□□ 0.71
PTPN3P26045 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.5■□□□□ 0.71
PTPN3P26045 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PTPN3P26045 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN3P26045 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN3P26045 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.5■□□□□ 0.71
PTPN3P26045 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN3P26045 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.5■□□□□ 0.71
PTPN3P26045 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN3P26045 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN3P26045 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN3P26045 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PTPN3P26045 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN3P26045 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN3P26045 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PTPN3P26045 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN3P26045 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPN3P26045 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN3P26045 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN3P26045 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN3P26045 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PTPN3P26045 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.49■□□□□ 0.71
PTPN3P26045 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPN3P26045 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.49■□□□□ 0.71
PTPN3P26045 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PTPN3P26045 KRT16P1-201ENST00000399124 1418 ntBASIC19.49■□□□□ 0.71
PTPN3P26045 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN3P26045 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN3P26045 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN3P26045 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN3P26045 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN3P26045 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
PTPN3P26045 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN3P26045 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN3P26045 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.48■□□□□ 0.71
PTPN3P26045 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN3P26045 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN3P26045 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PTPN3P26045 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN3P26045 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PTPN3P26045 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN3P26045 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.48■□□□□ 0.71
PTPN3P26045 CR392000.1-201ENST00000624770 1228 ntBASIC19.48■□□□□ 0.71
PTPN3P26045 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.48■□□□□ 0.71
PTPN3P26045 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PTPN3P26045 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN3P26045 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.48■□□□□ 0.71
PTPN3P26045 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PTPN3P26045 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN3P26045 AL020996.1-203ENST00000536896 2307 ntBASIC19.48■□□□□ 0.71
PTPN3P26045 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN3P26045 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PTPN3P26045 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.48■□□□□ 0.71
PTPN3P26045 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PTPN3P26045 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN3P26045 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN3P26045 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN3P26045 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN3P26045 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PTPN3P26045 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN3P26045 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN3P26045 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.47■□□□□ 0.71
PTPN3P26045 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN3P26045 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN3P26045 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN3P26045 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PTPN3P26045 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN3P26045 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN3P26045 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN3P26045 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PTPN3P26045 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms