Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LAMA1P25391 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LAMA1P25391 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.72■□□□□ 0.59
LAMA1P25391 AC104417.2-201ENST00000562989 1793 ntBASIC18.72■□□□□ 0.59
LAMA1P25391 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LAMA1P25391 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LAMA1P25391 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.72■□□□□ 0.59
LAMA1P25391 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LAMA1P25391 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LAMA1P25391 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LAMA1P25391 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.72■□□□□ 0.59
LAMA1P25391 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LAMA1P25391 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.72■□□□□ 0.59
LAMA1P25391 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.72■□□□□ 0.59
LAMA1P25391 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
LAMA1P25391 AC011498.5-201ENST00000592027 486 ntBASIC18.72■□□□□ 0.59
LAMA1P25391 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LAMA1P25391 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LAMA1P25391 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LAMA1P25391 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LAMA1P25391 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.72■□□□□ 0.59
LAMA1P25391 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LAMA1P25391 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LAMA1P25391 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LAMA1P25391 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LAMA1P25391 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LAMA1P25391 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LAMA1P25391 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LAMA1P25391 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.71■□□□□ 0.59
LAMA1P25391 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LAMA1P25391 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LAMA1P25391 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LAMA1P25391 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.71■□□□□ 0.59
LAMA1P25391 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LAMA1P25391 KRT18P31-201ENST00000506277 1292 ntBASIC18.71■□□□□ 0.59
LAMA1P25391 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.71■□□□□ 0.59
LAMA1P25391 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LAMA1P25391 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LAMA1P25391 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LAMA1P25391 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LAMA1P25391 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LAMA1P25391 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LAMA1P25391 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LAMA1P25391 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LAMA1P25391 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.71■□□□□ 0.59
LAMA1P25391 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.71■□□□□ 0.59
LAMA1P25391 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.71■□□□□ 0.58
LAMA1P25391 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LAMA1P25391 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
LAMA1P25391 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
LAMA1P25391 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
LAMA1P25391 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LAMA1P25391 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.7■□□□□ 0.58
LAMA1P25391 AP002414.4-201ENST00000589764 1148 ntBASIC18.7■□□□□ 0.58
LAMA1P25391 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.7■□□□□ 0.58
LAMA1P25391 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.7■□□□□ 0.58
LAMA1P25391 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LAMA1P25391 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.7■□□□□ 0.58
LAMA1P25391 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LAMA1P25391 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LAMA1P25391 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.7■□□□□ 0.58
LAMA1P25391 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LAMA1P25391 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LAMA1P25391 BX276092.5-203ENST00000456199 560 ntBASIC18.7■□□□□ 0.58
LAMA1P25391 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
LAMA1P25391 LINC01006-201ENST00000333319 2292 ntBASIC18.7■□□□□ 0.58
LAMA1P25391 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LAMA1P25391 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LAMA1P25391 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LAMA1P25391 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.7■□□□□ 0.58
LAMA1P25391 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LAMA1P25391 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LAMA1P25391 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LAMA1P25391 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LAMA1P25391 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LAMA1P25391 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.7■□□□□ 0.58
LAMA1P25391 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.7■□□□□ 0.58
LAMA1P25391 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.7■□□□□ 0.58
LAMA1P25391 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LAMA1P25391 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.69■□□□□ 0.58
LAMA1P25391 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LAMA1P25391 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LAMA1P25391 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LAMA1P25391 HLA-A-201ENST00000376802 1334 ntBASIC18.69■□□□□ 0.58
LAMA1P25391 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LAMA1P25391 SEC1P-202ENST00000473944 940 ntBASIC18.69■□□□□ 0.58
LAMA1P25391 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LAMA1P25391 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
LAMA1P25391 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.69■□□□□ 0.58
LAMA1P25391 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LAMA1P25391 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.69■□□□□ 0.58
LAMA1P25391 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LAMA1P25391 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LAMA1P25391 AL121672.3-201ENST00000608644 468 ntBASIC18.69■□□□□ 0.58
LAMA1P25391 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LAMA1P25391 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.69■□□□□ 0.58
LAMA1P25391 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.69■□□□□ 0.58
LAMA1P25391 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LAMA1P25391 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.69■□□□□ 0.58
LAMA1P25391 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms