Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NFKB1P19838 AL353807.1-201ENST00000427475 662 ntBASIC19.45■□□□□ 0.7
NFKB1P19838 TSPY21P-201ENST00000433481 731 ntBASIC19.45■□□□□ 0.7
NFKB1P19838 GCSHP5-201ENST00000443090 522 ntBASIC19.45■□□□□ 0.7
NFKB1P19838 KSR1P1-201ENST00000446298 240 ntBASIC19.45■□□□□ 0.7
NFKB1P19838 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.45■□□□□ 0.7
NFKB1P19838 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NFKB1P19838 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NFKB1P19838 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.45■□□□□ 0.7
NFKB1P19838 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.45■□□□□ 0.7
NFKB1P19838 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NFKB1P19838 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.45■□□□□ 0.7
NFKB1P19838 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.45■□□□□ 0.7
NFKB1P19838 AF186192.3-201ENST00000583427 947 ntBASIC19.45■□□□□ 0.7
NFKB1P19838 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.45■□□□□ 0.7
NFKB1P19838 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NFKB1P19838 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.45■□□□□ 0.7
NFKB1P19838 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.45■□□□□ 0.7
NFKB1P19838 AC131212.4-201ENST00000623606 975 ntBASIC19.45■□□□□ 0.7
NFKB1P19838 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.45■□□□□ 0.7
NFKB1P19838 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NFKB1P19838 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NFKB1P19838 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NFKB1P19838 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NFKB1P19838 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.45■□□□□ 0.7
NFKB1P19838 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NFKB1P19838 FEM1AP3-201ENST00000403722 1741 ntBASIC19.45■□□□□ 0.7
NFKB1P19838 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NFKB1P19838 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NFKB1P19838 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NFKB1P19838 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NFKB1P19838 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NFKB1P19838 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NFKB1P19838 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NFKB1P19838 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NFKB1P19838 AC006333.2-201ENST00000607957 2099 ntBASIC19.44■□□□□ 0.7
NFKB1P19838 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.44■□□□□ 0.7
NFKB1P19838 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NFKB1P19838 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NFKB1P19838 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NFKB1P19838 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NFKB1P19838 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NFKB1P19838 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NFKB1P19838 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.44■□□□□ 0.7
NFKB1P19838 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.44■□□□□ 0.7
NFKB1P19838 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NFKB1P19838 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
NFKB1P19838 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NFKB1P19838 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NFKB1P19838 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NFKB1P19838 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.44■□□□□ 0.7
NFKB1P19838 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NFKB1P19838 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NFKB1P19838 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NFKB1P19838 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NFKB1P19838 AC093503.3-201ENST00000624917 2352 ntBASIC19.43■□□□□ 0.7
NFKB1P19838 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.43■□□□□ 0.7
NFKB1P19838 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NFKB1P19838 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NFKB1P19838 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NFKB1P19838 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NFKB1P19838 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NFKB1P19838 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NFKB1P19838 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.43■□□□□ 0.7
NFKB1P19838 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.43■□□□□ 0.7
NFKB1P19838 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NFKB1P19838 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.43■□□□□ 0.7
NFKB1P19838 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.43■□□□□ 0.7
NFKB1P19838 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.43■□□□□ 0.7
NFKB1P19838 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NFKB1P19838 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NFKB1P19838 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NFKB1P19838 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NFKB1P19838 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.43■□□□□ 0.7
NFKB1P19838 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.43■□□□□ 0.7
NFKB1P19838 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.43■□□□□ 0.7
NFKB1P19838 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.43■□□□□ 0.7
NFKB1P19838 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NFKB1P19838 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.43■□□□□ 0.7
NFKB1P19838 CR392000.1-201ENST00000624770 1228 ntBASIC19.43■□□□□ 0.7
NFKB1P19838 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NFKB1P19838 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.43■□□□□ 0.7
NFKB1P19838 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NFKB1P19838 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.43■□□□□ 0.7
NFKB1P19838 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NFKB1P19838 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NFKB1P19838 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NFKB1P19838 KRT16P1-201ENST00000399124 1418 ntBASIC19.42■□□□□ 0.7
NFKB1P19838 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NFKB1P19838 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NFKB1P19838 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NFKB1P19838 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NFKB1P19838 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NFKB1P19838 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NFKB1P19838 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NFKB1P19838 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NFKB1P19838 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NFKB1P19838 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NFKB1P19838 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
NFKB1P19838 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms