Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.98■□□□□ 0.15
ATF4P18848 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATF4P18848 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.98■□□□□ 0.15
ATF4P18848 SIRPAP1-201ENST00000448467 1770 ntBASIC15.98■□□□□ 0.15
ATF4P18848 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.97■□□□□ 0.15
ATF4P18848 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATF4P18848 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATF4P18848 TSPY26P-201ENST00000476365 1326 ntBASIC15.97■□□□□ 0.15
ATF4P18848 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.97■□□□□ 0.15
ATF4P18848 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATF4P18848 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATF4P18848 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
ATF4P18848 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATF4P18848 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATF4P18848 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATF4P18848 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
ATF4P18848 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.97■□□□□ 0.15
ATF4P18848 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.97■□□□□ 0.15
ATF4P18848 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.97■□□□□ 0.15
ATF4P18848 AC087623.3-201ENST00000607047 1098 ntBASIC15.97■□□□□ 0.15
ATF4P18848 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.97■□□□□ 0.15
ATF4P18848 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATF4P18848 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATF4P18848 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATF4P18848 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATF4P18848 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
ATF4P18848 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
ATF4P18848 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATF4P18848 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATF4P18848 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATF4P18848 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
ATF4P18848 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.97■□□□□ 0.15
ATF4P18848 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATF4P18848 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ATF4P18848 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.96■□□□□ 0.15
ATF4P18848 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATF4P18848 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATF4P18848 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
ATF4P18848 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.96■□□□□ 0.15
ATF4P18848 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATF4P18848 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ATF4P18848 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATF4P18848 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATF4P18848 YBX1P1-201ENST00000445822 960 ntBASIC15.96■□□□□ 0.15
ATF4P18848 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.96■□□□□ 0.15
ATF4P18848 AL162430.1-201ENST00000480705 870 ntBASIC15.96■□□□□ 0.15
ATF4P18848 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC15.96■□□□□ 0.15
ATF4P18848 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATF4P18848 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATF4P18848 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ATF4P18848 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.96■□□□□ 0.15
ATF4P18848 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATF4P18848 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATF4P18848 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATF4P18848 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.96■□□□□ 0.15
ATF4P18848 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.96■□□□□ 0.14
ATF4P18848 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
ATF4P18848 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
ATF4P18848 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ATF4P18848 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ATF4P18848 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
ATF4P18848 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.95■□□□□ 0.14
ATF4P18848 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.95■□□□□ 0.14
ATF4P18848 AC090164.3-201ENST00000610780 2143 ntBASIC15.95■□□□□ 0.14
ATF4P18848 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATF4P18848 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATF4P18848 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.95■□□□□ 0.14
ATF4P18848 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATF4P18848 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.95■□□□□ 0.14
ATF4P18848 AC123595.1-201ENST00000440769 1046 ntBASIC15.95■□□□□ 0.14
ATF4P18848 AC034268.1-201ENST00000441047 882 ntBASIC15.95■□□□□ 0.14
ATF4P18848 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.95■□□□□ 0.14
ATF4P18848 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATF4P18848 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATF4P18848 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATF4P18848 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATF4P18848 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATF4P18848 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATF4P18848 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATF4P18848 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATF4P18848 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.95■□□□□ 0.14
ATF4P18848 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATF4P18848 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATF4P18848 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.95■□□□□ 0.14
ATF4P18848 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
ATF4P18848 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATF4P18848 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATF4P18848 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
ATF4P18848 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.95■□□□□ 0.14
ATF4P18848 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.94■□□□□ 0.14
ATF4P18848 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ATF4P18848 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
ATF4P18848 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATF4P18848 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATF4P18848 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATF4P18848 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATF4P18848 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ATF4P18848 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATF4P18848 CROCCP3-202ENST00000420820 1947 ntBASIC15.94■□□□□ 0.14
ATF4P18848 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms