Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN1P18031 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN1P18031 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN1P18031 CA15P1-201ENST00000481698 905 ntBASIC20.25■□□□□ 0.83
PTPN1P18031 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN1P18031 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN1P18031 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
PTPN1P18031 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN1P18031 AL023803.3-201ENST00000615559 522 ntBASIC20.25■□□□□ 0.83
PTPN1P18031 AC116562.4-202ENST00000641738 218 ntBASIC20.25■□□□□ 0.83
PTPN1P18031 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN1P18031 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN1P18031 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN1P18031 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
PTPN1P18031 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN1P18031 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PTPN1P18031 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN1P18031 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN1P18031 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.24■□□□□ 0.83
PTPN1P18031 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN1P18031 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PTPN1P18031 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN1P18031 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN1P18031 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN1P18031 CCR12P-201ENST00000446203 998 ntBASIC20.24■□□□□ 0.83
PTPN1P18031 ECEL1P2-202ENST00000465689 757 ntBASIC20.24■□□□□ 0.83
PTPN1P18031 AC128688.1-201ENST00000487626 519 ntBASIC20.24■□□□□ 0.83
PTPN1P18031 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN1P18031 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN1P18031 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN1P18031 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PTPN1P18031 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN1P18031 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN1P18031 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN1P18031 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN1P18031 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN1P18031 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN1P18031 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PTPN1P18031 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN1P18031 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN1P18031 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN1P18031 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN1P18031 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN1P18031 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
PTPN1P18031 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN1P18031 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.23■□□□□ 0.83
PTPN1P18031 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.23■□□□□ 0.83
PTPN1P18031 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN1P18031 AL032819.2-201ENST00000624543 2162 ntBASIC20.23■□□□□ 0.83
PTPN1P18031 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.23■□□□□ 0.83
PTPN1P18031 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN1P18031 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN1P18031 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN1P18031 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN1P18031 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN1P18031 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN1P18031 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN1P18031 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.23■□□□□ 0.83
PTPN1P18031 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN1P18031 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.23■□□□□ 0.83
PTPN1P18031 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN1P18031 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN1P18031 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN1P18031 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN1P18031 AC092338.2-201ENST00000568827 1415 ntBASIC20.22■□□□□ 0.83
PTPN1P18031 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
PTPN1P18031 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PTPN1P18031 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.22■□□□□ 0.83
PTPN1P18031 TSPY17P-201ENST00000450329 467 ntBASIC20.22■□□□□ 0.83
PTPN1P18031 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN1P18031 AC005363.2-201ENST00000618631 242 ntBASIC20.22■□□□□ 0.83
PTPN1P18031 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.22■□□□□ 0.83
PTPN1P18031 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN1P18031 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN1P18031 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN1P18031 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
PTPN1P18031 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PTPN1P18031 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN1P18031 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN1P18031 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN1P18031 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN1P18031 AC007663.1-201ENST00000438948 1240 ntBASIC20.21■□□□□ 0.83
PTPN1P18031 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.21■□□□□ 0.83
PTPN1P18031 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.21■□□□□ 0.83
PTPN1P18031 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.21■□□□□ 0.83
PTPN1P18031 AL353719.1-201ENST00000566847 864 ntBASIC20.21■□□□□ 0.83
PTPN1P18031 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PTPN1P18031 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PTPN1P18031 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN1P18031 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.21■□□□□ 0.83
PTPN1P18031 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PTPN1P18031 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN1P18031 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN1P18031 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN1P18031 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN1P18031 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.21■□□□□ 0.83
PTPN1P18031 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN1P18031 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN1P18031 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN1P18031 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms