Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NCK1P16333 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.07■□□□□ 0.48
NCK1P16333 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.07■□□□□ 0.48
NCK1P16333 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCK1P16333 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NCK1P16333 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.06■□□□□ 0.48
NCK1P16333 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.06■□□□□ 0.48
NCK1P16333 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCK1P16333 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.06■□□□□ 0.48
NCK1P16333 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCK1P16333 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NCK1P16333 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NCK1P16333 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.06■□□□□ 0.48
NCK1P16333 NOC2LP2-201ENST00000407594 1944 ntBASIC18.06■□□□□ 0.48
NCK1P16333 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCK1P16333 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NCK1P16333 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
NCK1P16333 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NCK1P16333 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCK1P16333 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCK1P16333 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCK1P16333 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.06■□□□□ 0.48
NCK1P16333 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NCK1P16333 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCK1P16333 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.06■□□□□ 0.48
NCK1P16333 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
NCK1P16333 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCK1P16333 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCK1P16333 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NCK1P16333 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCK1P16333 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.05■□□□□ 0.48
NCK1P16333 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.05■□□□□ 0.48
NCK1P16333 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.05■□□□□ 0.48
NCK1P16333 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NCK1P16333 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCK1P16333 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCK1P16333 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.05■□□□□ 0.48
NCK1P16333 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.05■□□□□ 0.48
NCK1P16333 AC124283.5-201ENST00000624661 1809 ntBASIC18.05■□□□□ 0.48
NCK1P16333 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NCK1P16333 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCK1P16333 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCK1P16333 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCK1P16333 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NCK1P16333 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCK1P16333 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCK1P16333 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCK1P16333 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCK1P16333 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCK1P16333 LSM12P1-201ENST00000411836 588 ntBASIC18.05■□□□□ 0.48
NCK1P16333 AC007322.1-201ENST00000426983 750 ntBASIC18.05■□□□□ 0.48
NCK1P16333 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.05■□□□□ 0.48
NCK1P16333 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.05■□□□□ 0.48
NCK1P16333 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCK1P16333 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.05■□□□□ 0.48
NCK1P16333 AC087623.3-201ENST00000607047 1098 ntBASIC18.05■□□□□ 0.48
NCK1P16333 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCK1P16333 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCK1P16333 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCK1P16333 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCK1P16333 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.05■□□□□ 0.48
NCK1P16333 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCK1P16333 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCK1P16333 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCK1P16333 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCK1P16333 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NCK1P16333 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.05■□□□□ 0.48
NCK1P16333 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCK1P16333 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
NCK1P16333 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.04■□□□□ 0.48
NCK1P16333 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCK1P16333 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCK1P16333 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCK1P16333 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCK1P16333 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCK1P16333 AC090340.1-201ENST00000620778 4980 ntBASIC18.04■□□□□ 0.48
NCK1P16333 ANO7L1-203ENST00000602586 1720 ntBASIC18.04■□□□□ 0.48
NCK1P16333 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCK1P16333 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NCK1P16333 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCK1P16333 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.04■□□□□ 0.48
NCK1P16333 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCK1P16333 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.04■□□□□ 0.48
NCK1P16333 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCK1P16333 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NCK1P16333 KRT18P5-201ENST00000436075 1291 ntBASIC18.04■□□□□ 0.48
NCK1P16333 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.04■□□□□ 0.48
NCK1P16333 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.04■□□□□ 0.48
NCK1P16333 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCK1P16333 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCK1P16333 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.04■□□□□ 0.48
NCK1P16333 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCK1P16333 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.04■□□□□ 0.48
NCK1P16333 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.04■□□□□ 0.48
NCK1P16333 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.03■□□□□ 0.48
NCK1P16333 HCG11-201ENST00000411553 5696 ntBASIC18.03■□□□□ 0.48
NCK1P16333 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCK1P16333 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCK1P16333 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NCK1P16333 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms