Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CCL2P13500 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.67■□□□□ 0.26
CCL2P13500 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL2P13500 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL2P13500 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.67■□□□□ 0.26
CCL2P13500 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL2P13500 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL2P13500 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CCL2P13500 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL2P13500 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL2P13500 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL2P13500 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL2P13500 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL2P13500 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL2P13500 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL2P13500 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL2P13500 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CCL2P13500 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL2P13500 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.66■□□□□ 0.26
CCL2P13500 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL2P13500 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL2P13500 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CCL2P13500 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CCL2P13500 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CCL2P13500 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL2P13500 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.66■□□□□ 0.26
CCL2P13500 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL2P13500 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL2P13500 AC008040.2-201ENST00000461049 708 ntBASIC16.66■□□□□ 0.26
CCL2P13500 NUDT16P1-203ENST00000513809 620 ntBASIC16.66■□□□□ 0.26
CCL2P13500 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.66■□□□□ 0.26
CCL2P13500 AP003071.4-201ENST00000562276 1284 ntBASIC16.66■□□□□ 0.26
CCL2P13500 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL2P13500 MIR6786-201ENST00000616843 113 ntBASIC16.66■□□□□ 0.26
CCL2P13500 AC011298.2-201ENST00000617989 482 ntBASIC16.66■□□□□ 0.26
CCL2P13500 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CCL2P13500 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.66■□□□□ 0.26
CCL2P13500 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
CCL2P13500 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL2P13500 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.66■□□□□ 0.26
CCL2P13500 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL2P13500 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL2P13500 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCL2P13500 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL2P13500 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL2P13500 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL2P13500 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL2P13500 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL2P13500 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.65■□□□□ 0.26
CCL2P13500 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL2P13500 AC087289.5-201ENST00000586076 3175 ntBASIC16.65■□□□□ 0.26
CCL2P13500 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCL2P13500 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL2P13500 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL2P13500 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL2P13500 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL2P13500 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL2P13500 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL2P13500 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL2P13500 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCL2P13500 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL2P13500 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL2P13500 B3GAT3P1-201ENST00000471720 806 ntBASIC16.65■□□□□ 0.26
CCL2P13500 AC091390.4-202ENST00000476426 537 ntBASIC16.65■□□□□ 0.26
CCL2P13500 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL2P13500 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCL2P13500 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL2P13500 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.65■□□□□ 0.26
CCL2P13500 MIR4497-201ENST00000583208 89 ntBASIC16.65■□□□□ 0.26
CCL2P13500 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.65■□□□□ 0.26
CCL2P13500 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.65■□□□□ 0.26
CCL2P13500 REXO1L10P-201ENST00000615707 1290 ntBASIC16.65■□□□□ 0.26
CCL2P13500 REXO1L12P-201ENST00000622156 912 ntBASIC16.65■□□□□ 0.26
CCL2P13500 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL2P13500 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL2P13500 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.65■□□□□ 0.26
CCL2P13500 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL2P13500 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCL2P13500 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL2P13500 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL2P13500 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL2P13500 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCL2P13500 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCL2P13500 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCL2P13500 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL2P13500 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL2P13500 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CCL2P13500 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.64■□□□□ 0.25
CCL2P13500 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL2P13500 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL2P13500 MESTP1-201ENST00000404287 994 ntBASIC16.64■□□□□ 0.25
CCL2P13500 AC004951.3-201ENST00000418645 1148 ntBASIC16.64■□□□□ 0.25
CCL2P13500 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CCL2P13500 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.64■□□□□ 0.25
CCL2P13500 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.64■□□□□ 0.25
CCL2P13500 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CCL2P13500 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.64■□□□□ 0.25
CCL2P13500 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL2P13500 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL2P13500 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms