Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.42■□□□□ 0.38
CCL3P10147 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.42■□□□□ 0.38
CCL3P10147 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.42■□□□□ 0.38
CCL3P10147 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL3P10147 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.42■□□□□ 0.38
CCL3P10147 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCL3P10147 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.41■□□□□ 0.38
CCL3P10147 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.41■□□□□ 0.38
CCL3P10147 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCL3P10147 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.41■□□□□ 0.38
CCL3P10147 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL3P10147 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL3P10147 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL3P10147 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.41■□□□□ 0.38
CCL3P10147 ATP5G1P1-201ENST00000448724 379 ntBASIC17.41■□□□□ 0.38
CCL3P10147 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.41■□□□□ 0.38
CCL3P10147 AP003041.3-201ENST00000527151 707 ntBASIC17.41■□□□□ 0.38
CCL3P10147 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.41■□□□□ 0.38
CCL3P10147 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCL3P10147 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.41■□□□□ 0.38
CCL3P10147 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL3P10147 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL3P10147 TEX21P-204ENST00000641479 1693 ntBASIC17.41■□□□□ 0.38
CCL3P10147 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL3P10147 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.41■□□□□ 0.38
CCL3P10147 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.41■□□□□ 0.38
CCL3P10147 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL3P10147 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.41■□□□□ 0.38
CCL3P10147 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.41■□□□□ 0.38
CCL3P10147 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL3P10147 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.4■□□□□ 0.38
CCL3P10147 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.4■□□□□ 0.38
CCL3P10147 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.4■□□□□ 0.38
CCL3P10147 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL3P10147 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCL3P10147 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL3P10147 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL3P10147 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.4■□□□□ 0.38
CCL3P10147 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL3P10147 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCL3P10147 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
CCL3P10147 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CCL3P10147 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL3P10147 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCL3P10147 MIR1224-201ENST00000408193 85 ntBASIC17.4■□□□□ 0.38
CCL3P10147 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.4■□□□□ 0.38
CCL3P10147 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.4■□□□□ 0.38
CCL3P10147 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL3P10147 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.4■□□□□ 0.38
CCL3P10147 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.4■□□□□ 0.38
CCL3P10147 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCL3P10147 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCL3P10147 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL3P10147 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.4■□□□□ 0.38
CCL3P10147 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL3P10147 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.4■□□□□ 0.38
CCL3P10147 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL3P10147 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL3P10147 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.4■□□□□ 0.38
CCL3P10147 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCL3P10147 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCL3P10147 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.39■□□□□ 0.37
CCL3P10147 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCL3P10147 AC007952.6-201ENST00000573168 2673 ntBASIC17.39■□□□□ 0.37
CCL3P10147 AC003957.1-201ENST00000625108 2673 ntBASIC17.39■□□□□ 0.37
CCL3P10147 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL3P10147 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL3P10147 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.39■□□□□ 0.37
CCL3P10147 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CCL3P10147 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL3P10147 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
CCL3P10147 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL3P10147 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCL3P10147 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCL3P10147 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL3P10147 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.39■□□□□ 0.37
CCL3P10147 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.39■□□□□ 0.37
CCL3P10147 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.39■□□□□ 0.37
CCL3P10147 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL3P10147 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
CCL3P10147 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.39■□□□□ 0.37
CCL3P10147 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL3P10147 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CCL3P10147 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.39■□□□□ 0.37
CCL3P10147 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCL3P10147 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CCL3P10147 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCL3P10147 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.38■□□□□ 0.37
CCL3P10147 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL3P10147 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL3P10147 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL3P10147 AC093484.2-201ENST00000580996 2166 ntBASIC17.38■□□□□ 0.37
CCL3P10147 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL3P10147 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL3P10147 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CCL3P10147 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL3P10147 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.38■□□□□ 0.37
CCL3P10147 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCL3P10147 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.38■□□□□ 0.37
CCL3P10147 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms