Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SMIM17P0DL12 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
SMIM17P0DL12 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.22□□□□□ -0.13
SMIM17P0DL12 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SMIM17P0DL12 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SMIM17P0DL12 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
SMIM17P0DL12 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 AC106820.2-201ENST00000563775 3264 ntBASIC14.22□□□□□ -0.13
SMIM17P0DL12 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 MCRIP2P1-201ENST00000394346 511 ntBASIC14.22□□□□□ -0.13
SMIM17P0DL12 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SMIM17P0DL12 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.22□□□□□ -0.13
SMIM17P0DL12 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.22□□□□□ -0.13
SMIM17P0DL12 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.22□□□□□ -0.13
SMIM17P0DL12 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SMIM17P0DL12 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SMIM17P0DL12 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SMIM17P0DL12 AL133373.2-201ENST00000623187 2828 ntBASIC14.22□□□□□ -0.13
SMIM17P0DL12 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SMIM17P0DL12 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
SMIM17P0DL12 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.22□□□□□ -0.13
SMIM17P0DL12 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.22□□□□□ -0.13
SMIM17P0DL12 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM17P0DL12 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM17P0DL12 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SMIM17P0DL12 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM17P0DL12 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.21□□□□□ -0.13
SMIM17P0DL12 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM17P0DL12 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM17P0DL12 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM17P0DL12 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM17P0DL12 PCDHB18P-201ENST00000524813 2368 ntBASIC14.21□□□□□ -0.13
SMIM17P0DL12 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM17P0DL12 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM17P0DL12 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.21□□□□□ -0.13
SMIM17P0DL12 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM17P0DL12 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
SMIM17P0DL12 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM17P0DL12 AC010536.3-201ENST00000620306 533 ntBASIC14.21□□□□□ -0.13
SMIM17P0DL12 AC013268.1-206ENST00000638368 961 ntBASIC14.21□□□□□ -0.13
SMIM17P0DL12 AC112229.1-201ENST00000639295 961 ntBASIC14.21□□□□□ -0.13
SMIM17P0DL12 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM17P0DL12 PTBP1P-201ENST00000554374 1601 ntBASIC14.21□□□□□ -0.13
SMIM17P0DL12 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMIM17P0DL12 AL139384.1-201ENST00000612143 3047 ntBASIC14.21□□□□□ -0.13
SMIM17P0DL12 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
SMIM17P0DL12 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.21□□□□□ -0.14
SMIM17P0DL12 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SMIM17P0DL12 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.21□□□□□ -0.14
SMIM17P0DL12 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.21□□□□□ -0.14
SMIM17P0DL12 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
SMIM17P0DL12 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.21□□□□□ -0.14
SMIM17P0DL12 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SMIM17P0DL12 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
SMIM17P0DL12 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SMIM17P0DL12 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SMIM17P0DL12 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM17P0DL12 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM17P0DL12 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM17P0DL12 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM17P0DL12 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
SMIM17P0DL12 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM17P0DL12 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM17P0DL12 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM17P0DL12 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM17P0DL12 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC14.2□□□□□ -0.14
SMIM17P0DL12 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM17P0DL12 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.2□□□□□ -0.14
SMIM17P0DL12 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
SMIM17P0DL12 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.2□□□□□ -0.14
SMIM17P0DL12 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SMIM17P0DL12 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM17P0DL12 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.2□□□□□ -0.14
SMIM17P0DL12 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM17P0DL12 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM17P0DL12 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM17P0DL12 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM17P0DL12 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM17P0DL12 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
SMIM17P0DL12 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM17P0DL12 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms