Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC172P0C7W6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC172P0C7W6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC172P0C7W6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.64■□□□□ 0.9
CCDC172P0C7W6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC172P0C7W6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC172P0C7W6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
CCDC172P0C7W6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 AC004264.1-201ENST00000608354 794 ntBASIC20.64■□□□□ 0.89
CCDC172P0C7W6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 AC090340.1-201ENST00000620778 4980 ntBASIC20.64■□□□□ 0.89
CCDC172P0C7W6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC172P0C7W6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.63■□□□□ 0.89
CCDC172P0C7W6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 AL355802.2-201ENST00000402069 882 ntBASIC20.62■□□□□ 0.89
CCDC172P0C7W6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 AC020763.4-201ENST00000623414 4170 ntBASIC20.62■□□□□ 0.89
CCDC172P0C7W6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 IRX1P1-201ENST00000438849 1838 ntBASIC20.62■□□□□ 0.89
CCDC172P0C7W6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC172P0C7W6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC172P0C7W6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC172P0C7W6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC172P0C7W6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC172P0C7W6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CCDC172P0C7W6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC172P0C7W6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC172P0C7W6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC172P0C7W6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
CCDC172P0C7W6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CCDC172P0C7W6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CCDC172P0C7W6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC172P0C7W6 KRT17P3-201ENST00000420566 1262 ntBASIC20.61■□□□□ 0.89
CCDC172P0C7W6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC172P0C7W6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms