Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.9■□□□□ 0.94
CLTAP09496 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CLTAP09496 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.9■□□□□ 0.94
CLTAP09496 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLTAP09496 AL390955.1-201ENST00000428694 934 ntBASIC20.9■□□□□ 0.94
CLTAP09496 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.9■□□□□ 0.94
CLTAP09496 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.9■□□□□ 0.94
CLTAP09496 SLC25A1P4-201ENST00000567977 778 ntBASIC20.9■□□□□ 0.94
CLTAP09496 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.9■□□□□ 0.94
CLTAP09496 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLTAP09496 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLTAP09496 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLTAP09496 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.9■□□□□ 0.94
CLTAP09496 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLTAP09496 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLTAP09496 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLTAP09496 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLTAP09496 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLTAP09496 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CLTAP09496 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.9■□□□□ 0.94
CLTAP09496 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLTAP09496 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.89■□□□□ 0.94
CLTAP09496 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CLTAP09496 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLTAP09496 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLTAP09496 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLTAP09496 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.89■□□□□ 0.93
CLTAP09496 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLTAP09496 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
CLTAP09496 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.89■□□□□ 0.93
CLTAP09496 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLTAP09496 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLTAP09496 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLTAP09496 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
CLTAP09496 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.89■□□□□ 0.93
CLTAP09496 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CLTAP09496 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
CLTAP09496 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLTAP09496 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
CLTAP09496 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
CLTAP09496 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.88■□□□□ 0.93
CLTAP09496 KRT8P9-201ENST00000558927 1449 ntBASIC20.88■□□□□ 0.93
CLTAP09496 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.88■□□□□ 0.93
CLTAP09496 AC096733.2-201ENST00000609937 1394 ntBASIC20.88■□□□□ 0.93
CLTAP09496 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CLTAP09496 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.88■□□□□ 0.93
CLTAP09496 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLTAP09496 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.88■□□□□ 0.93
CLTAP09496 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLTAP09496 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.88■□□□□ 0.93
CLTAP09496 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLTAP09496 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLTAP09496 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLTAP09496 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.88■□□□□ 0.93
CLTAP09496 AC211429.1-201ENST00000415277 523 ntBASIC20.88■□□□□ 0.93
CLTAP09496 CRYGFP-201ENST00000418459 633 ntBASIC20.88■□□□□ 0.93
CLTAP09496 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.88■□□□□ 0.93
CLTAP09496 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.88■□□□□ 0.93
CLTAP09496 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.88■□□□□ 0.93
CLTAP09496 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.88■□□□□ 0.93
CLTAP09496 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.88■□□□□ 0.93
CLTAP09496 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CLTAP09496 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CLTAP09496 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLTAP09496 SDHAP1-207ENST00000440850 2000 ntBASIC20.88■□□□□ 0.93
CLTAP09496 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLTAP09496 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLTAP09496 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLTAP09496 Z82202.1-201ENST00000623446 1880 ntBASIC20.88■□□□□ 0.93
CLTAP09496 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLTAP09496 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLTAP09496 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLTAP09496 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLTAP09496 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLTAP09496 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.87■□□□□ 0.93
CLTAP09496 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.87■□□□□ 0.93
CLTAP09496 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.87■□□□□ 0.93
CLTAP09496 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.87■□□□□ 0.93
CLTAP09496 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLTAP09496 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.87■□□□□ 0.93
CLTAP09496 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.87■□□□□ 0.93
CLTAP09496 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.87■□□□□ 0.93
CLTAP09496 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.87■□□□□ 0.93
CLTAP09496 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLTAP09496 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CLTAP09496 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLTAP09496 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.87■□□□□ 0.93
CLTAP09496 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CLTAP09496 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLTAP09496 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.87■□□□□ 0.93
CLTAP09496 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLTAP09496 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
CLTAP09496 AC093484.2-201ENST00000580996 2166 ntBASIC20.86■□□□□ 0.93
CLTAP09496 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLTAP09496 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLTAP09496 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLTAP09496 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLTAP09496 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLTAP09496 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLTAP09496 MFAP1P1-201ENST00000442257 1255 ntBASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms