Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
APOEP02649 AC104417.2-201ENST00000562989 1793 ntBASIC20.01■□□□□ 0.79
APOEP02649 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.01■□□□□ 0.79
APOEP02649 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.01■□□□□ 0.79
APOEP02649 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
APOEP02649 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
APOEP02649 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
APOEP02649 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.01■□□□□ 0.79
APOEP02649 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.01■□□□□ 0.79
APOEP02649 AC011298.2-201ENST00000617989 482 ntBASIC20.01■□□□□ 0.79
APOEP02649 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
APOEP02649 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
APOEP02649 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
APOEP02649 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
APOEP02649 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
APOEP02649 AP000974.1-201ENST00000623909 2387 ntBASIC20.01■□□□□ 0.79
APOEP02649 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
APOEP02649 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
APOEP02649 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
APOEP02649 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
APOEP02649 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
APOEP02649 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
APOEP02649 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20■□□□□ 0.79
APOEP02649 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
APOEP02649 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
APOEP02649 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
APOEP02649 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
APOEP02649 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
APOEP02649 UNC93B2-201ENST00000285383 730 ntBASIC20■□□□□ 0.79
APOEP02649 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
APOEP02649 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20■□□□□ 0.79
APOEP02649 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
APOEP02649 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20■□□□□ 0.79
APOEP02649 AC011506.1-201ENST00000474329 610 ntBASIC20■□□□□ 0.79
APOEP02649 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20■□□□□ 0.79
APOEP02649 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20■□□□□ 0.79
APOEP02649 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20■□□□□ 0.79
APOEP02649 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
APOEP02649 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
APOEP02649 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
APOEP02649 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20■□□□□ 0.79
APOEP02649 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20■□□□□ 0.79
APOEP02649 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20■□□□□ 0.79
APOEP02649 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20■□□□□ 0.79
APOEP02649 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20■□□□□ 0.79
APOEP02649 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
APOEP02649 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.99■□□□□ 0.79
APOEP02649 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.99■□□□□ 0.79
APOEP02649 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
APOEP02649 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.99■□□□□ 0.79
APOEP02649 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
APOEP02649 RBM17P1-201ENST00000453646 1190 ntBASIC19.99■□□□□ 0.79
APOEP02649 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.99■□□□□ 0.79
APOEP02649 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.99■□□□□ 0.79
APOEP02649 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.99■□□□□ 0.79
APOEP02649 DGCR10-201ENST00000609839 495 ntBASIC19.99■□□□□ 0.79
APOEP02649 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.99■□□□□ 0.79
APOEP02649 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
APOEP02649 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.99■□□□□ 0.79
APOEP02649 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
APOEP02649 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
APOEP02649 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
APOEP02649 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.99■□□□□ 0.79
APOEP02649 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
APOEP02649 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
APOEP02649 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
APOEP02649 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
APOEP02649 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
APOEP02649 Z82202.1-201ENST00000623446 1880 ntBASIC19.99■□□□□ 0.79
APOEP02649 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
APOEP02649 AL020996.1-203ENST00000536896 2307 ntBASIC19.98■□□□□ 0.79
APOEP02649 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
APOEP02649 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
APOEP02649 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
APOEP02649 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
APOEP02649 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
APOEP02649 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.98■□□□□ 0.79
APOEP02649 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.98■□□□□ 0.79
APOEP02649 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
APOEP02649 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.98■□□□□ 0.79
APOEP02649 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
APOEP02649 MESTP1-201ENST00000404287 994 ntBASIC19.98■□□□□ 0.79
APOEP02649 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.98■□□□□ 0.79
APOEP02649 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
APOEP02649 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.98■□□□□ 0.79
APOEP02649 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.98■□□□□ 0.79
APOEP02649 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.98■□□□□ 0.79
APOEP02649 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.98■□□□□ 0.79
APOEP02649 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.98■□□□□ 0.79
APOEP02649 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
APOEP02649 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.98■□□□□ 0.79
APOEP02649 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.98■□□□□ 0.79
APOEP02649 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
APOEP02649 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
APOEP02649 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.98■□□□□ 0.79
APOEP02649 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
APOEP02649 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
APOEP02649 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
APOEP02649 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
APOEP02649 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms