Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT6AP02538 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
KRT6AP02538 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6AP02538 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6AP02538 AC006333.2-201ENST00000607957 2099 ntBASIC18.53■□□□□ 0.56
KRT6AP02538 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6AP02538 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
KRT6AP02538 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT6AP02538 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT6AP02538 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.52■□□□□ 0.56
KRT6AP02538 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT6AP02538 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT6AP02538 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT6AP02538 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT6AP02538 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT6AP02538 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.52■□□□□ 0.56
KRT6AP02538 IRX1P1-201ENST00000438849 1838 ntBASIC18.52■□□□□ 0.56
KRT6AP02538 KRT17P3-201ENST00000420566 1262 ntBASIC18.52■□□□□ 0.56
KRT6AP02538 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.52■□□□□ 0.56
KRT6AP02538 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT6AP02538 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT6AP02538 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
KRT6AP02538 RNA5SP413-201ENST00000516373 109 ntBASIC18.52■□□□□ 0.56
KRT6AP02538 AP003097.1-201ENST00000530657 1135 ntBASIC18.52■□□□□ 0.56
KRT6AP02538 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.52■□□□□ 0.56
KRT6AP02538 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.52■□□□□ 0.56
KRT6AP02538 AC008403.3-201ENST00000598924 454 ntBASIC18.52■□□□□ 0.56
KRT6AP02538 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.52■□□□□ 0.56
KRT6AP02538 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT6AP02538 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT6AP02538 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.52■□□□□ 0.56
KRT6AP02538 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
KRT6AP02538 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
KRT6AP02538 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KRT6AP02538 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
KRT6AP02538 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
KRT6AP02538 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6AP02538 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
KRT6AP02538 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT6AP02538 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6AP02538 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
KRT6AP02538 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6AP02538 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
KRT6AP02538 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6AP02538 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.51■□□□□ 0.55
KRT6AP02538 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6AP02538 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT6AP02538 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6AP02538 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6AP02538 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6AP02538 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT6AP02538 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6AP02538 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT6AP02538 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6AP02538 ID1-201ENST00000376105 1233 ntBASIC18.51■□□□□ 0.55
KRT6AP02538 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
KRT6AP02538 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6AP02538 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT6AP02538 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.51■□□□□ 0.55
KRT6AP02538 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT6AP02538 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
KRT6AP02538 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6AP02538 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6AP02538 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6AP02538 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6AP02538 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
KRT6AP02538 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6AP02538 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6AP02538 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT6AP02538 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.51■□□□□ 0.55
KRT6AP02538 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
KRT6AP02538 CROCCP3-202ENST00000420820 1947 ntBASIC18.51■□□□□ 0.55
KRT6AP02538 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT6AP02538 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT6AP02538 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT6AP02538 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT6AP02538 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KRT6AP02538 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT6AP02538 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT6AP02538 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.5■□□□□ 0.55
KRT6AP02538 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT6AP02538 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT6AP02538 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.5■□□□□ 0.55
KRT6AP02538 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.5■□□□□ 0.55
KRT6AP02538 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KRT6AP02538 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT6AP02538 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
KRT6AP02538 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT6AP02538 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT6AP02538 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
KRT6AP02538 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT6AP02538 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT6AP02538 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT6AP02538 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT6AP02538 FEM1AP3-201ENST00000403722 1741 ntBASIC18.49■□□□□ 0.55
KRT6AP02538 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT6AP02538 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT6AP02538 AL138781.2-201ENST00000617896 1843 ntBASIC18.49■□□□□ 0.55
KRT6AP02538 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.49■□□□□ 0.55
KRT6AP02538 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms