Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.17■□□□□ 0.66
TRBC1P01850 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBC1P01850 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBC1P01850 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBC1P01850 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBC1P01850 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBC1P01850 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TRBC1P01850 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.17■□□□□ 0.66
TRBC1P01850 CRYGFP-201ENST00000418459 633 ntBASIC19.17■□□□□ 0.66
TRBC1P01850 MFAP1P1-201ENST00000442257 1255 ntBASIC19.17■□□□□ 0.66
TRBC1P01850 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.17■□□□□ 0.66
TRBC1P01850 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRBC1P01850 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRBC1P01850 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.17■□□□□ 0.66
TRBC1P01850 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.17■□□□□ 0.66
TRBC1P01850 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRBC1P01850 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBC1P01850 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBC1P01850 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBC1P01850 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.17■□□□□ 0.66
TRBC1P01850 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.16■□□□□ 0.66
TRBC1P01850 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.16■□□□□ 0.66
TRBC1P01850 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBC1P01850 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRBC1P01850 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRBC1P01850 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRBC1P01850 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
TRBC1P01850 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBC1P01850 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBC1P01850 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.16■□□□□ 0.66
TRBC1P01850 MIR1238-201ENST00000408483 83 ntBASIC19.16■□□□□ 0.66
TRBC1P01850 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.16■□□□□ 0.66
TRBC1P01850 AL390955.1-201ENST00000428694 934 ntBASIC19.16■□□□□ 0.66
TRBC1P01850 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.16■□□□□ 0.66
TRBC1P01850 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.16■□□□□ 0.66
TRBC1P01850 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBC1P01850 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TRBC1P01850 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.16■□□□□ 0.66
TRBC1P01850 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBC1P01850 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.16■□□□□ 0.66
TRBC1P01850 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBC1P01850 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.16■□□□□ 0.66
TRBC1P01850 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBC1P01850 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBC1P01850 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBC1P01850 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRBC1P01850 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.15■□□□□ 0.66
TRBC1P01850 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
TRBC1P01850 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRBC1P01850 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TRBC1P01850 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBC1P01850 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBC1P01850 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBC1P01850 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRBC1P01850 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.15■□□□□ 0.66
TRBC1P01850 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRBC1P01850 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRBC1P01850 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.15■□□□□ 0.66
TRBC1P01850 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRBC1P01850 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.15■□□□□ 0.66
TRBC1P01850 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.15■□□□□ 0.66
TRBC1P01850 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.15■□□□□ 0.66
TRBC1P01850 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.15■□□□□ 0.66
TRBC1P01850 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.15■□□□□ 0.66
TRBC1P01850 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBC1P01850 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBC1P01850 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.15■□□□□ 0.66
TRBC1P01850 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRBC1P01850 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRBC1P01850 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRBC1P01850 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRBC1P01850 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.14■□□□□ 0.66
TRBC1P01850 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
TRBC1P01850 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.14■□□□□ 0.65
TRBC1P01850 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TRBC1P01850 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBC1P01850 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.14■□□□□ 0.65
TRBC1P01850 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBC1P01850 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBC1P01850 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.14■□□□□ 0.65
TRBC1P01850 MMP23A-201ENST00000234610 1017 ntBASIC19.14■□□□□ 0.65
TRBC1P01850 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBC1P01850 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBC1P01850 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.14■□□□□ 0.65
TRBC1P01850 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBC1P01850 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.14■□□□□ 0.65
TRBC1P01850 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBC1P01850 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.14■□□□□ 0.65
TRBC1P01850 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TRBC1P01850 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBC1P01850 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRBC1P01850 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRBC1P01850 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.14■□□□□ 0.65
TRBC1P01850 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBC1P01850 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBC1P01850 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRBC1P01850 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.14■□□□□ 0.65
TRBC1P01850 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TRBC1P01850 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBC1P01850 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms