Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
VAPBO95292 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VAPBO95292 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAPBO95292 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.22■□□□□ 0.67
VAPBO95292 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.22■□□□□ 0.67
VAPBO95292 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.22■□□□□ 0.67
VAPBO95292 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.22■□□□□ 0.67
VAPBO95292 AC073648.6-201ENST00000641589 218 ntBASIC19.22■□□□□ 0.67
VAPBO95292 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAPBO95292 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
VAPBO95292 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
VAPBO95292 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAPBO95292 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.22■□□□□ 0.67
VAPBO95292 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAPBO95292 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.22■□□□□ 0.67
VAPBO95292 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VAPBO95292 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAPBO95292 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAPBO95292 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAPBO95292 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.21■□□□□ 0.67
VAPBO95292 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
VAPBO95292 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.21■□□□□ 0.67
VAPBO95292 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
VAPBO95292 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VAPBO95292 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VAPBO95292 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.21■□□□□ 0.67
VAPBO95292 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
VAPBO95292 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VAPBO95292 AL160286.2-201ENST00000567150 934 ntBASIC19.21■□□□□ 0.67
VAPBO95292 RN7SL471P-201ENST00000580476 299 ntBASIC19.21■□□□□ 0.67
VAPBO95292 MIR4651-201ENST00000582622 73 ntBASIC19.21■□□□□ 0.67
VAPBO95292 AC124016.1-201ENST00000609552 612 ntBASIC19.21■□□□□ 0.67
VAPBO95292 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.21■□□□□ 0.67
VAPBO95292 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.21■□□□□ 0.67
VAPBO95292 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VAPBO95292 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VAPBO95292 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.21■□□□□ 0.67
VAPBO95292 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.21■□□□□ 0.67
VAPBO95292 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VAPBO95292 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAPBO95292 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAPBO95292 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAPBO95292 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.2■□□□□ 0.66
VAPBO95292 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.2■□□□□ 0.66
VAPBO95292 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.2■□□□□ 0.66
VAPBO95292 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAPBO95292 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAPBO95292 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
VAPBO95292 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
VAPBO95292 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAPBO95292 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAPBO95292 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAPBO95292 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.2■□□□□ 0.66
VAPBO95292 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAPBO95292 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAPBO95292 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAPBO95292 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAPBO95292 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.2■□□□□ 0.66
VAPBO95292 KRT16P5-201ENST00000455284 522 ntBASIC19.2■□□□□ 0.66
VAPBO95292 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAPBO95292 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VAPBO95292 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAPBO95292 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAPBO95292 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.2■□□□□ 0.66
VAPBO95292 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.2■□□□□ 0.66
VAPBO95292 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAPBO95292 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
VAPBO95292 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.2■□□□□ 0.66
VAPBO95292 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
VAPBO95292 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAPBO95292 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VAPBO95292 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAPBO95292 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAPBO95292 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAPBO95292 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAPBO95292 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAPBO95292 CROCCP3-202ENST00000420820 1947 ntBASIC19.19■□□□□ 0.66
VAPBO95292 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VAPBO95292 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
VAPBO95292 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
VAPBO95292 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAPBO95292 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.19■□□□□ 0.66
VAPBO95292 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.19■□□□□ 0.66
VAPBO95292 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAPBO95292 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VAPBO95292 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAPBO95292 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.19■□□□□ 0.66
VAPBO95292 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
VAPBO95292 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
VAPBO95292 FEM1AP3-201ENST00000403722 1741 ntBASIC19.19■□□□□ 0.66
VAPBO95292 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAPBO95292 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
VAPBO95292 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAPBO95292 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAPBO95292 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VAPBO95292 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAPBO95292 AC020763.4-201ENST00000623414 4170 ntBASIC19.18■□□□□ 0.66
VAPBO95292 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.18■□□□□ 0.66
VAPBO95292 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.18■□□□□ 0.66
VAPBO95292 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms