Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CLPXO76031 AC084018.2-201ENST00000613093 2607 ntBASIC17.34■□□□□ 0.37
CLPXO76031 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLPXO76031 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.33■□□□□ 0.37
CLPXO76031 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLPXO76031 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLPXO76031 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.33■□□□□ 0.37
CLPXO76031 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLPXO76031 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CLPXO76031 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLPXO76031 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.33■□□□□ 0.37
CLPXO76031 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLPXO76031 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CLPXO76031 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
CLPXO76031 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CLPXO76031 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLPXO76031 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CLPXO76031 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CLPXO76031 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.33■□□□□ 0.36
CLPXO76031 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.33■□□□□ 0.36
CLPXO76031 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLPXO76031 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CLPXO76031 BCL2-203ENST00000589955 5011 ntBASIC17.33■□□□□ 0.36
CLPXO76031 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.33■□□□□ 0.36
CLPXO76031 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLPXO76031 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
CLPXO76031 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLPXO76031 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.33■□□□□ 0.36
CLPXO76031 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLPXO76031 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLPXO76031 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CLPXO76031 AL139384.1-201ENST00000612143 3047 ntBASIC17.33■□□□□ 0.36
CLPXO76031 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CLPXO76031 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLPXO76031 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.33■□□□□ 0.36
CLPXO76031 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.33■□□□□ 0.36
CLPXO76031 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CLPXO76031 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLPXO76031 AC116050.2-201ENST00000612102 1779 ntBASIC17.33■□□□□ 0.36
CLPXO76031 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.32■□□□□ 0.36
CLPXO76031 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLPXO76031 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CLPXO76031 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.32■□□□□ 0.36
CLPXO76031 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CLPXO76031 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.32■□□□□ 0.36
CLPXO76031 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.32■□□□□ 0.36
CLPXO76031 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.32■□□□□ 0.36
CLPXO76031 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.32■□□□□ 0.36
CLPXO76031 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.32■□□□□ 0.36
CLPXO76031 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.32■□□□□ 0.36
CLPXO76031 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.32■□□□□ 0.36
CLPXO76031 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.32■□□□□ 0.36
CLPXO76031 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLPXO76031 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLPXO76031 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLPXO76031 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLPXO76031 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.31■□□□□ 0.36
CLPXO76031 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLPXO76031 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLPXO76031 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLPXO76031 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLPXO76031 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLPXO76031 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLPXO76031 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLPXO76031 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.31■□□□□ 0.36
CLPXO76031 AC073592.3-201ENST00000625118 1834 ntBASIC17.31■□□□□ 0.36
CLPXO76031 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLPXO76031 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLPXO76031 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLPXO76031 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLPXO76031 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLPXO76031 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.31■□□□□ 0.36
CLPXO76031 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLPXO76031 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.31■□□□□ 0.36
CLPXO76031 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.31■□□□□ 0.36
CLPXO76031 AC126763.1-201ENST00000552015 2118 ntBASIC17.31■□□□□ 0.36
CLPXO76031 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms