Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.55■□□□□ 0.72
CLDN11O75508 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN11O75508 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN11O75508 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN11O75508 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN11O75508 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN11O75508 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.55■□□□□ 0.72
CLDN11O75508 TSPY17P-201ENST00000450329 467 ntBASIC19.55■□□□□ 0.72
CLDN11O75508 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.55■□□□□ 0.72
CLDN11O75508 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.55■□□□□ 0.72
CLDN11O75508 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CLDN11O75508 AL023803.3-201ENST00000615559 522 ntBASIC19.55■□□□□ 0.72
CLDN11O75508 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CLDN11O75508 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.55■□□□□ 0.72
CLDN11O75508 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN11O75508 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN11O75508 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CLDN11O75508 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN11O75508 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN11O75508 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN11O75508 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
CLDN11O75508 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CLDN11O75508 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CLDN11O75508 AC007952.6-201ENST00000573168 2673 ntBASIC19.54■□□□□ 0.72
CLDN11O75508 AC003957.1-201ENST00000625108 2673 ntBASIC19.54■□□□□ 0.72
CLDN11O75508 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CLDN11O75508 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.54■□□□□ 0.72
CLDN11O75508 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN11O75508 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN11O75508 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN11O75508 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.54■□□□□ 0.72
CLDN11O75508 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.54■□□□□ 0.72
CLDN11O75508 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN11O75508 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.54■□□□□ 0.72
CLDN11O75508 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN11O75508 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.54■□□□□ 0.72
CLDN11O75508 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
CLDN11O75508 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CLDN11O75508 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN11O75508 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN11O75508 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN11O75508 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.53■□□□□ 0.72
CLDN11O75508 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN11O75508 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN11O75508 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CLDN11O75508 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.53■□□□□ 0.72
CLDN11O75508 AC092338.2-201ENST00000568827 1415 ntBASIC19.53■□□□□ 0.72
CLDN11O75508 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN11O75508 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN11O75508 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN11O75508 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
CLDN11O75508 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.53■□□□□ 0.72
CLDN11O75508 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
CLDN11O75508 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN11O75508 AL353719.1-201ENST00000566847 864 ntBASIC19.53■□□□□ 0.72
CLDN11O75508 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.53■□□□□ 0.72
CLDN11O75508 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN11O75508 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN11O75508 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.53■□□□□ 0.72
CLDN11O75508 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN11O75508 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN11O75508 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CLDN11O75508 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN11O75508 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN11O75508 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.53■□□□□ 0.72
CLDN11O75508 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN11O75508 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CLDN11O75508 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.52■□□□□ 0.72
CLDN11O75508 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.52■□□□□ 0.72
CLDN11O75508 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.52■□□□□ 0.72
CLDN11O75508 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN11O75508 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN11O75508 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN11O75508 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.52■□□□□ 0.72
CLDN11O75508 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.52■□□□□ 0.72
CLDN11O75508 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.52■□□□□ 0.72
CLDN11O75508 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN11O75508 AC010653.2-201ENST00000623505 997 ntBASIC19.52■□□□□ 0.72
CLDN11O75508 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN11O75508 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN11O75508 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN11O75508 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.52■□□□□ 0.71
CLDN11O75508 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN11O75508 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.51■□□□□ 0.71
CLDN11O75508 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN11O75508 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN11O75508 AC007663.1-201ENST00000438948 1240 ntBASIC19.51■□□□□ 0.71
CLDN11O75508 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN11O75508 AC005363.2-201ENST00000618631 242 ntBASIC19.51■□□□□ 0.71
CLDN11O75508 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN11O75508 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN11O75508 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.51■□□□□ 0.71
CLDN11O75508 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN11O75508 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN11O75508 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CLDN11O75508 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN11O75508 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN11O75508 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN11O75508 FEM1AP3-201ENST00000403722 1741 ntBASIC19.51■□□□□ 0.71
CLDN11O75508 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms