Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 MIR4785-201ENST00000585005 73 ntBASIC17.82■□□□□ 0.44
TRIM3O75382 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM3O75382 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM3O75382 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM3O75382 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM3O75382 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM3O75382 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM3O75382 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM3O75382 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRIM3O75382 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM3O75382 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM3O75382 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM3O75382 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRIM3O75382 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM3O75382 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM3O75382 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM3O75382 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM3O75382 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.81■□□□□ 0.44
TRIM3O75382 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM3O75382 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM3O75382 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM3O75382 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM3O75382 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRIM3O75382 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TRIM3O75382 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM3O75382 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
TRIM3O75382 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TRIM3O75382 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM3O75382 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRIM3O75382 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM3O75382 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM3O75382 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TRIM3O75382 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TRIM3O75382 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRIM3O75382 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
TRIM3O75382 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM3O75382 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM3O75382 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM3O75382 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRIM3O75382 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM3O75382 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM3O75382 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM3O75382 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRIM3O75382 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM3O75382 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TRIM3O75382 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM3O75382 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM3O75382 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM3O75382 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM3O75382 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM3O75382 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TRIM3O75382 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM3O75382 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM3O75382 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRIM3O75382 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM3O75382 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM3O75382 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM3O75382 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRIM3O75382 AC026471.5-201ENST00000615068 467 ntBASIC17.8■□□□□ 0.44
TRIM3O75382 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM3O75382 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM3O75382 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRIM3O75382 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM3O75382 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM3O75382 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM3O75382 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM3O75382 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRIM3O75382 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM3O75382 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM3O75382 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM3O75382 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM3O75382 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRIM3O75382 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
TRIM3O75382 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM3O75382 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRIM3O75382 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM3O75382 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM3O75382 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM3O75382 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM3O75382 AL445675.2-201ENST00000620291 557 ntBASIC17.79■□□□□ 0.44
TRIM3O75382 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM3O75382 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM3O75382 KRT16P1-201ENST00000399124 1418 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms