Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.52■□□□□ 0.72
SYNCRIPO60506 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.52■□□□□ 0.72
SYNCRIPO60506 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNCRIPO60506 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SYNCRIPO60506 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SYNCRIPO60506 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.51■□□□□ 0.71
SYNCRIPO60506 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.51■□□□□ 0.71
SYNCRIPO60506 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNCRIPO60506 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SYNCRIPO60506 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNCRIPO60506 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNCRIPO60506 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNCRIPO60506 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNCRIPO60506 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SYNCRIPO60506 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.51■□□□□ 0.71
SYNCRIPO60506 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNCRIPO60506 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNCRIPO60506 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNCRIPO60506 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SYNCRIPO60506 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SYNCRIPO60506 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.51■□□□□ 0.71
SYNCRIPO60506 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SYNCRIPO60506 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.51■□□□□ 0.71
SYNCRIPO60506 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SYNCRIPO60506 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SYNCRIPO60506 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SYNCRIPO60506 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.51■□□□□ 0.71
SYNCRIPO60506 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
SYNCRIPO60506 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.51■□□□□ 0.71
SYNCRIPO60506 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SYNCRIPO60506 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.51■□□□□ 0.71
SYNCRIPO60506 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNCRIPO60506 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SYNCRIPO60506 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.51■□□□□ 0.71
SYNCRIPO60506 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNCRIPO60506 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNCRIPO60506 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNCRIPO60506 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNCRIPO60506 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNCRIPO60506 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SYNCRIPO60506 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 AK4P3-201ENST00000418260 669 ntBASIC19.5■□□□□ 0.71
SYNCRIPO60506 AC007663.1-201ENST00000438948 1240 ntBASIC19.5■□□□□ 0.71
SYNCRIPO60506 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 LINC01238-205ENST00000567549 1107 ntBASIC19.5■□□□□ 0.71
SYNCRIPO60506 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 AC006011.2-201ENST00000621313 1158 ntBASIC19.5■□□□□ 0.71
SYNCRIPO60506 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNCRIPO60506 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNCRIPO60506 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.5■□□□□ 0.71
SYNCRIPO60506 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SYNCRIPO60506 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.49■□□□□ 0.71
SYNCRIPO60506 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SYNCRIPO60506 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SYNCRIPO60506 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.49■□□□□ 0.71
SYNCRIPO60506 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.49■□□□□ 0.71
SYNCRIPO60506 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SYNCRIPO60506 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SYNCRIPO60506 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SYNCRIPO60506 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SYNCRIPO60506 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
SYNCRIPO60506 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SYNCRIPO60506 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
SYNCRIPO60506 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SYNCRIPO60506 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
SYNCRIPO60506 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
SYNCRIPO60506 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.49■□□□□ 0.71
SYNCRIPO60506 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SYNCRIPO60506 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.49■□□□□ 0.71
SYNCRIPO60506 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SYNCRIPO60506 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SYNCRIPO60506 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SYNCRIPO60506 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SYNCRIPO60506 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.49■□□□□ 0.71
SYNCRIPO60506 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SYNCRIPO60506 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SYNCRIPO60506 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SYNCRIPO60506 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SYNCRIPO60506 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SYNCRIPO60506 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SYNCRIPO60506 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.48■□□□□ 0.71
SYNCRIPO60506 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SYNCRIPO60506 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms