Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EXTL3O43909 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EXTL3O43909 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
EXTL3O43909 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.76■□□□□ 0.91
EXTL3O43909 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.76■□□□□ 0.91
EXTL3O43909 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EXTL3O43909 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.76■□□□□ 0.91
EXTL3O43909 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.76■□□□□ 0.91
EXTL3O43909 FP475955.4-201ENST00000623131 1990 ntBASIC20.76■□□□□ 0.91
EXTL3O43909 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EXTL3O43909 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
EXTL3O43909 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
EXTL3O43909 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EXTL3O43909 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
EXTL3O43909 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.75■□□□□ 0.91
EXTL3O43909 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.75■□□□□ 0.91
EXTL3O43909 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EXTL3O43909 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.75■□□□□ 0.91
EXTL3O43909 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EXTL3O43909 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
EXTL3O43909 FITM1-202ENST00000559294 800 ntBASIC20.75■□□□□ 0.91
EXTL3O43909 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.75■□□□□ 0.91
EXTL3O43909 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EXTL3O43909 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EXTL3O43909 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
EXTL3O43909 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EXTL3O43909 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
EXTL3O43909 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
EXTL3O43909 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.75■□□□□ 0.91
EXTL3O43909 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EXTL3O43909 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EXTL3O43909 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
EXTL3O43909 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
EXTL3O43909 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
EXTL3O43909 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
EXTL3O43909 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EXTL3O43909 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EXTL3O43909 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.74■□□□□ 0.91
EXTL3O43909 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EXTL3O43909 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.74■□□□□ 0.91
EXTL3O43909 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.74■□□□□ 0.91
EXTL3O43909 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.74■□□□□ 0.91
EXTL3O43909 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EXTL3O43909 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EXTL3O43909 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EXTL3O43909 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
EXTL3O43909 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
EXTL3O43909 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.74■□□□□ 0.91
EXTL3O43909 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
EXTL3O43909 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EXTL3O43909 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EXTL3O43909 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
EXTL3O43909 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXTL3O43909 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXTL3O43909 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXTL3O43909 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXTL3O43909 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
EXTL3O43909 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
EXTL3O43909 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXTL3O43909 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXTL3O43909 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXTL3O43909 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EXTL3O43909 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.73■□□□□ 0.91
EXTL3O43909 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EXTL3O43909 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXTL3O43909 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXTL3O43909 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXTL3O43909 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXTL3O43909 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.73■□□□□ 0.91
EXTL3O43909 MIR1238-201ENST00000408483 83 ntBASIC20.73■□□□□ 0.91
EXTL3O43909 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.73■□□□□ 0.91
EXTL3O43909 AL390955.1-201ENST00000428694 934 ntBASIC20.73■□□□□ 0.91
EXTL3O43909 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.73■□□□□ 0.91
EXTL3O43909 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.73■□□□□ 0.91
EXTL3O43909 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXTL3O43909 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXTL3O43909 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EXTL3O43909 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.73■□□□□ 0.91
EXTL3O43909 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXTL3O43909 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
EXTL3O43909 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXTL3O43909 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
EXTL3O43909 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EXTL3O43909 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXTL3O43909 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.72■□□□□ 0.91
EXTL3O43909 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
EXTL3O43909 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXTL3O43909 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.72■□□□□ 0.91
EXTL3O43909 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
EXTL3O43909 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXTL3O43909 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.72■□□□□ 0.91
EXTL3O43909 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.72■□□□□ 0.91
EXTL3O43909 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.72■□□□□ 0.91
EXTL3O43909 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXTL3O43909 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXTL3O43909 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXTL3O43909 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
EXTL3O43909 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXTL3O43909 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXTL3O43909 AL161938.1-201ENST00000569833 2180 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms