Protein–RNA interactions for Protein: O43602

DCX, Neuronal migration protein doublecortin, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCXO43602 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DCXO43602 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.17■□□□□ 0.82
DCXO43602 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DCXO43602 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
DCXO43602 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DCXO43602 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
DCXO43602 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
DCXO43602 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DCXO43602 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.17■□□□□ 0.82
DCXO43602 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.17■□□□□ 0.82
DCXO43602 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.17■□□□□ 0.82
DCXO43602 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.17■□□□□ 0.82
DCXO43602 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.17■□□□□ 0.82
DCXO43602 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
DCXO43602 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
DCXO43602 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.17■□□□□ 0.82
DCXO43602 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
DCXO43602 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.17■□□□□ 0.82
DCXO43602 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DCXO43602 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.17■□□□□ 0.82
DCXO43602 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.17■□□□□ 0.82
DCXO43602 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.17■□□□□ 0.82
DCXO43602 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DCXO43602 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DCXO43602 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DCXO43602 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DCXO43602 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DCXO43602 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DCXO43602 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.16■□□□□ 0.82
DCXO43602 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DCXO43602 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DCXO43602 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
DCXO43602 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.16■□□□□ 0.82
DCXO43602 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.16■□□□□ 0.82
DCXO43602 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
DCXO43602 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.16■□□□□ 0.82
DCXO43602 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
DCXO43602 AC092329.2-201ENST00000598402 547 ntBASIC20.16■□□□□ 0.82
DCXO43602 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DCXO43602 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DCXO43602 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DCXO43602 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
DCXO43602 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DCXO43602 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.16■□□□□ 0.82
DCXO43602 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DCXO43602 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
DCXO43602 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DCXO43602 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.16■□□□□ 0.82
DCXO43602 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.15■□□□□ 0.82
DCXO43602 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.15■□□□□ 0.82
DCXO43602 AL512408.1-201ENST00000569378 2000 ntBASIC20.15■□□□□ 0.82
DCXO43602 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
DCXO43602 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
DCXO43602 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DCXO43602 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
DCXO43602 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DCXO43602 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DCXO43602 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DCXO43602 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DCXO43602 UNC93B7-201ENST00000509439 705 ntBASIC20.15■□□□□ 0.82
DCXO43602 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.15■□□□□ 0.82
DCXO43602 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DCXO43602 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.15■□□□□ 0.82
DCXO43602 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
DCXO43602 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.15■□□□□ 0.82
DCXO43602 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
DCXO43602 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
DCXO43602 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DCXO43602 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DCXO43602 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.15■□□□□ 0.82
DCXO43602 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
DCXO43602 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DCXO43602 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DCXO43602 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
DCXO43602 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
DCXO43602 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.15■□□□□ 0.82
DCXO43602 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.15■□□□□ 0.82
DCXO43602 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
DCXO43602 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
DCXO43602 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
DCXO43602 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DCXO43602 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.14■□□□□ 0.81
DCXO43602 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
DCXO43602 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
DCXO43602 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DCXO43602 KRT8P20-201ENST00000423953 1409 ntBASIC20.14■□□□□ 0.81
DCXO43602 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DCXO43602 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.14■□□□□ 0.81
DCXO43602 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.14■□□□□ 0.81
DCXO43602 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.14■□□□□ 0.81
DCXO43602 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.14■□□□□ 0.81
DCXO43602 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.14■□□□□ 0.81
DCXO43602 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.14■□□□□ 0.81
DCXO43602 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.14■□□□□ 0.81
DCXO43602 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
DCXO43602 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DCXO43602 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DCXO43602 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DCXO43602 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DCXO43602 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms