Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PROM1O43490 AC107956.1-201ENST00000494359 873 ntBASIC18.15■□□□□ 0.5
PROM1O43490 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.15■□□□□ 0.5
PROM1O43490 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.15■□□□□ 0.5
PROM1O43490 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.15■□□□□ 0.5
PROM1O43490 CR392000.1-201ENST00000624770 1228 ntBASIC18.15■□□□□ 0.5
PROM1O43490 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PROM1O43490 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PROM1O43490 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PROM1O43490 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.15■□□□□ 0.5
PROM1O43490 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
PROM1O43490 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PROM1O43490 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PROM1O43490 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PROM1O43490 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PROM1O43490 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PROM1O43490 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PROM1O43490 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PROM1O43490 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
PROM1O43490 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.14■□□□□ 0.5
PROM1O43490 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PROM1O43490 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PROM1O43490 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.14■□□□□ 0.49
PROM1O43490 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PROM1O43490 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PROM1O43490 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.14■□□□□ 0.49
PROM1O43490 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.14■□□□□ 0.49
PROM1O43490 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PROM1O43490 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.14■□□□□ 0.49
PROM1O43490 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.14■□□□□ 0.49
PROM1O43490 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.14■□□□□ 0.49
PROM1O43490 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PROM1O43490 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.14■□□□□ 0.49
PROM1O43490 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PROM1O43490 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PROM1O43490 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PROM1O43490 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PROM1O43490 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.14■□□□□ 0.49
PROM1O43490 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PROM1O43490 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.14■□□□□ 0.49
PROM1O43490 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PROM1O43490 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PROM1O43490 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.13■□□□□ 0.49
PROM1O43490 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PROM1O43490 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PROM1O43490 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PROM1O43490 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PROM1O43490 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PROM1O43490 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PROM1O43490 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PROM1O43490 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PROM1O43490 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PROM1O43490 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.13■□□□□ 0.49
PROM1O43490 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PROM1O43490 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PROM1O43490 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.13■□□□□ 0.49
PROM1O43490 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.13■□□□□ 0.49
PROM1O43490 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PROM1O43490 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.13■□□□□ 0.49
PROM1O43490 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.13■□□□□ 0.49
PROM1O43490 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.13■□□□□ 0.49
PROM1O43490 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PROM1O43490 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.13■□□□□ 0.49
PROM1O43490 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PROM1O43490 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PROM1O43490 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
PROM1O43490 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
PROM1O43490 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.13■□□□□ 0.49
PROM1O43490 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PROM1O43490 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PROM1O43490 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PROM1O43490 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PROM1O43490 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PROM1O43490 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PROM1O43490 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PROM1O43490 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PROM1O43490 AC012618.2-201ENST00000428058 849 ntBASIC18.12■□□□□ 0.49
PROM1O43490 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PROM1O43490 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PROM1O43490 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.12■□□□□ 0.49
PROM1O43490 AC233702.5-201ENST00000584107 538 ntBASIC18.12■□□□□ 0.49
PROM1O43490 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.12■□□□□ 0.49
PROM1O43490 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.12■□□□□ 0.49
PROM1O43490 AL031985.4-201ENST00000642138 673 ntBASIC18.12■□□□□ 0.49
PROM1O43490 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.12■□□□□ 0.49
PROM1O43490 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PROM1O43490 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PROM1O43490 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PROM1O43490 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PROM1O43490 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PROM1O43490 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PROM1O43490 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PROM1O43490 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
PROM1O43490 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.12■□□□□ 0.49
PROM1O43490 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PROM1O43490 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PROM1O43490 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.12■□□□□ 0.49
PROM1O43490 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.12■□□□□ 0.49
PROM1O43490 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.11■□□□□ 0.49
PROM1O43490 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms