Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM38O00635 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM38O00635 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM38O00635 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM38O00635 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM38O00635 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM38O00635 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM38O00635 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM38O00635 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM38O00635 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM38O00635 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM38O00635 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.22■□□□□ 0.67
TRIM38O00635 SLC25A3P1-201ENST00000443844 931 ntBASIC19.22■□□□□ 0.67
TRIM38O00635 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM38O00635 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM38O00635 AL445675.2-201ENST00000620291 557 ntBASIC19.22■□□□□ 0.67
TRIM38O00635 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM38O00635 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM38O00635 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM38O00635 AC116351.2-201ENST00000606540 1585 ntBASIC19.22■□□□□ 0.67
TRIM38O00635 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TRIM38O00635 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM38O00635 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM38O00635 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TRIM38O00635 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM38O00635 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM38O00635 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM38O00635 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM38O00635 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM38O00635 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM38O00635 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM38O00635 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM38O00635 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM38O00635 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM38O00635 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRIM38O00635 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.21■□□□□ 0.67
TRIM38O00635 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM38O00635 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
TRIM38O00635 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM38O00635 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM38O00635 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TRIM38O00635 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.21■□□□□ 0.67
TRIM38O00635 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.21■□□□□ 0.67
TRIM38O00635 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM38O00635 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRIM38O00635 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM38O00635 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM38O00635 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRIM38O00635 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.66
TRIM38O00635 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM38O00635 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM38O00635 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM38O00635 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM38O00635 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM38O00635 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM38O00635 TFP1-202ENST00000475455 1573 ntBASIC19.2■□□□□ 0.66
TRIM38O00635 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM38O00635 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM38O00635 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM38O00635 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM38O00635 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM38O00635 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRIM38O00635 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.2■□□□□ 0.66
TRIM38O00635 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.2■□□□□ 0.66
TRIM38O00635 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
TRIM38O00635 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TRIM38O00635 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM38O00635 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRIM38O00635 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM38O00635 FSCN1P1-201ENST00000568912 1481 ntBASIC19.2■□□□□ 0.66
TRIM38O00635 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TRIM38O00635 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.2■□□□□ 0.66
TRIM38O00635 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM38O00635 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.2■□□□□ 0.66
TRIM38O00635 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM38O00635 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM38O00635 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM38O00635 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM38O00635 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM38O00635 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM38O00635 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM38O00635 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TRIM38O00635 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM38O00635 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM38O00635 AC011506.1-201ENST00000474329 610 ntBASIC19.19■□□□□ 0.66
TRIM38O00635 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM38O00635 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM38O00635 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM38O00635 AC026271.3-201ENST00000571884 352 ntBASIC19.19■□□□□ 0.66
TRIM38O00635 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TRIM38O00635 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM38O00635 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM38O00635 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM38O00635 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRIM38O00635 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM38O00635 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TRIM38O00635 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRIM38O00635 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM38O00635 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM38O00635 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms