Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.1■□□□□ 0.01
LINC01548A6NM66 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01548A6NM66 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01548A6NM66 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01548A6NM66 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01548A6NM66 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01548A6NM66 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01548A6NM66 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01548A6NM66 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.09■□□□□ 0.01
LINC01548A6NM66 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01548A6NM66 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01548A6NM66 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01548A6NM66 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01548A6NM66 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01548A6NM66 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LINC01548A6NM66 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.09■□□□□ 0.01
LINC01548A6NM66 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.09■□□□□ 0.01
LINC01548A6NM66 ECEL1P3-201ENST00000427961 737 ntBASIC15.09■□□□□ 0.01
LINC01548A6NM66 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.09■□□□□ 0.01
LINC01548A6NM66 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.09■□□□□ 0.01
LINC01548A6NM66 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01548A6NM66 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.09■□□□□ 0.01
LINC01548A6NM66 AC133561.5-201ENST00000635547 218 ntBASIC15.09■□□□□ 0.01
LINC01548A6NM66 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01548A6NM66 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01548A6NM66 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
LINC01548A6NM66 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01548A6NM66 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.09■□□□□ 0.01
LINC01548A6NM66 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
LINC01548A6NM66 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LINC01548A6NM66 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LINC01548A6NM66 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
LINC01548A6NM66 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LINC01548A6NM66 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LINC01548A6NM66 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.08■□□□□ 0.01
LINC01548A6NM66 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
LINC01548A6NM66 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.08■□□□□ 0
LINC01548A6NM66 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01548A6NM66 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LINC01548A6NM66 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.08■□□□□ 0
LINC01548A6NM66 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.08■□□□□ 0
LINC01548A6NM66 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01548A6NM66 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.08■□□□□ 0
LINC01548A6NM66 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01548A6NM66 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01548A6NM66 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.08■□□□□ 0
LINC01548A6NM66 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.08■□□□□ 0
LINC01548A6NM66 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.08■□□□□ 0
LINC01548A6NM66 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.08■□□□□ 0
LINC01548A6NM66 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.08■□□□□ 0
LINC01548A6NM66 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.08■□□□□ 0
LINC01548A6NM66 CKBP1-201ENST00000565489 1086 ntBASIC15.08■□□□□ 0
LINC01548A6NM66 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.08■□□□□ 0
LINC01548A6NM66 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.08■□□□□ 0
LINC01548A6NM66 AC010947.1-201ENST00000623454 693 ntBASIC15.08■□□□□ 0
LINC01548A6NM66 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.08■□□□□ 0
LINC01548A6NM66 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.08■□□□□ 0
LINC01548A6NM66 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01548A6NM66 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01548A6NM66 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.08■□□□□ 0
LINC01548A6NM66 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01548A6NM66 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01548A6NM66 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.08■□□□□ 0
LINC01548A6NM66 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.08■□□□□ 0
LINC01548A6NM66 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.08■□□□□ 0
LINC01548A6NM66 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
LINC01548A6NM66 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01548A6NM66 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01548A6NM66 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LINC01548A6NM66 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.07■□□□□ 0
LINC01548A6NM66 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.07■□□□□ 0
LINC01548A6NM66 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01548A6NM66 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01548A6NM66 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01548A6NM66 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.07■□□□□ 0
LINC01548A6NM66 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
LINC01548A6NM66 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01548A6NM66 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01548A6NM66 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01548A6NM66 INGX-201ENST00000359239 846 ntBASIC15.07■□□□□ 0
LINC01548A6NM66 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
LINC01548A6NM66 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LINC01548A6NM66 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.07■□□□□ 0
LINC01548A6NM66 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.07■□□□□ 0
LINC01548A6NM66 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.07■□□□□ 0
LINC01548A6NM66 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.07■□□□□ 0
LINC01548A6NM66 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01548A6NM66 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.07■□□□□ 0
LINC01548A6NM66 AC096733.2-201ENST00000609937 1394 ntBASIC15.07■□□□□ 0
LINC01548A6NM66 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.07■□□□□ 0
LINC01548A6NM66 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.07■□□□□ 0
LINC01548A6NM66 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.07■□□□□ 0
LINC01548A6NM66 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.07■□□□□ 0
LINC01548A6NM66 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01548A6NM66 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.07■□□□□ 0
LINC01548A6NM66 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.07■□□□□ 0
LINC01548A6NM66 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC01548A6NM66 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LINC01548A6NM66 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LINC01548A6NM66 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms