Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC124016.1-201ENST00000609552 612 ntBASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-4A0A1B0GX49 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC233263.1-201ENST00000578059 224 ntBASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC004408.2-201ENST00000623613 2777 ntBASIC13.49□□□□□ -0.25
TRBV6-4A0A1B0GX49 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 AL049812.1-201ENST00000432563 2267 ntBASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC006333.2-201ENST00000607957 2099 ntBASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC093503.3-201ENST00000624917 2352 ntBASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 CD99P1-205ENST00000527459 561 ntBASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 AC006058.3-201ENST00000606217 1069 ntBASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-4A0A1B0GX49 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms