Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 AC006557.6-201ENST00000623071 864 ntBASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 AC073111.5-205ENST00000641717 521 ntBASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 FP475955.4-201ENST00000623131 1990 ntBASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRAV21A0A0B4J279 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 Z98044.1-201ENST00000632503 1764 ntBASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 DUSP5P2-201ENST00000426873 1033 ntBASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 AC026185.1-201ENST00000445748 174 ntBASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 AC079598.2-202ENST00000546624 1451 ntBASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV21A0A0B4J279 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 SDHAP1-207ENST00000440850 2000 ntBASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 MIR663A-201ENST00000385250 93 ntBASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 MIPEPP3-201ENST00000412105 444 ntBASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV21A0A0B4J279 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TRAV21A0A0B4J279 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
TRAV21A0A0B4J279 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV21A0A0B4J279 AC093525.10-201ENST00000625130 1569 ntBASIC14.21□□□□□ -0.14
TRAV21A0A0B4J279 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV21A0A0B4J279 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV21A0A0B4J279 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.21□□□□□ -0.14
TRAV21A0A0B4J279 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms