Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.08□□□□□ -0.15
TRAV8-6A0A0B4J262 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV8-6A0A0B4J262 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.08□□□□□ -0.15
TRAV8-6A0A0B4J262 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV8-6A0A0B4J262 Z82202.1-201ENST00000623446 1880 ntBASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 AC026185.1-201ENST00000445748 174 ntBASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 AC005181.1-201ENST00000604782 1256 ntBASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 AC141586.5-201ENST00000624546 2050 ntBASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-6A0A0B4J262 AL356309.3-201ENST00000624132 1934 ntBASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 DLX3-202ENST00000512495 834 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 RARRES2P4-201ENST00000514074 484 ntBASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 OR10C1-204ENST00000622521 1039 ntBASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 AC068338.2-201ENST00000563278 1430 ntBASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-6A0A0B4J262 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV8-6A0A0B4J262 AC009113.1-201ENST00000570267 2443 ntBASIC14.06□□□□□ -0.16
TRAV8-6A0A0B4J262 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-6A0A0B4J262 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRAV8-6A0A0B4J262 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-6A0A0B4J262 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV8-6A0A0B4J262 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-6A0A0B4J262 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-6A0A0B4J262 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-6A0A0B4J262 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV8-6A0A0B4J262 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV8-6A0A0B4J262 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-6A0A0B4J262 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV8-6A0A0B4J262 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-6A0A0B4J262 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRAV8-6A0A0B4J262 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-6A0A0B4J262 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-6A0A0B4J262 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV8-6A0A0B4J262 CYP2T1P-201ENST00000432607 1285 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms