Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 HLA-A-209ENST00000638375 975 ntBASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV5-3A0A0A0MS03 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 NOC2LP2-201ENST00000407594 1944 ntBASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 AL138781.1-201ENST00000566567 1274 ntBASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.92■□□□□ 0.46
TRBV5-3A0A0A0MS03 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 AL160286.2-201ENST00000567150 934 ntBASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-3A0A0A0MS03 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
TRBV5-3A0A0A0MS03 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms