Protein–RNA interactions for Protein: Q9HCN4

GPN1, GPN-loop GTPase 1, humanhuman

Predicted RBP Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1Q9HCN4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.51■■□□□ 1.03
GPN1Q9HCN4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GPN1Q9HCN4 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GPN1Q9HCN4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GPN1Q9HCN4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.5■■□□□ 1.03
GPN1Q9HCN4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
GPN1Q9HCN4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.49■■□□□ 1.03
GPN1Q9HCN4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
GPN1Q9HCN4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GPN1Q9HCN4 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GPN1Q9HCN4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GPN1Q9HCN4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GPN1Q9HCN4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GPN1Q9HCN4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
GPN1Q9HCN4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
GPN1Q9HCN4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.47■■□□□ 1.03
GPN1Q9HCN4 AC145676.1-201ENST00000514988 2004 ntBASIC21.47■■□□□ 1.03
GPN1Q9HCN4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GPN1Q9HCN4 AP004833.2-201ENST00000532228 1454 ntBASIC21.46■■□□□ 1.03
GPN1Q9HCN4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
GPN1Q9HCN4 AC093323.1-202ENST00000635031 2045 ntBASIC21.46■■□□□ 1.03
GPN1Q9HCN4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
GPN1Q9HCN4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GPN1Q9HCN4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GPN1Q9HCN4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
GPN1Q9HCN4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GPN1Q9HCN4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
GPN1Q9HCN4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GPN1Q9HCN4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
GPN1Q9HCN4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GPN1Q9HCN4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.44■■□□□ 1.02
GPN1Q9HCN4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
GPN1Q9HCN4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
GPN1Q9HCN4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GPN1Q9HCN4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GPN1Q9HCN4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GPN1Q9HCN4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GPN1Q9HCN4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.43■■□□□ 1.02
GPN1Q9HCN4 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GPN1Q9HCN4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GPN1Q9HCN4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.42■■□□□ 1.02
GPN1Q9HCN4 AC010864.1-201ENST00000609407 1511 ntBASIC21.42■■□□□ 1.02
GPN1Q9HCN4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GPN1Q9HCN4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
GPN1Q9HCN4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GPN1Q9HCN4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
GPN1Q9HCN4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
GPN1Q9HCN4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
GPN1Q9HCN4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
GPN1Q9HCN4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.41■■□□□ 1.02
GPN1Q9HCN4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GPN1Q9HCN4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GPN1Q9HCN4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
GPN1Q9HCN4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GPN1Q9HCN4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
GPN1Q9HCN4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
GPN1Q9HCN4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.39■■□□□ 1.02
GPN1Q9HCN4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
GPN1Q9HCN4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.39■■□□□ 1.01
GPN1Q9HCN4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
GPN1Q9HCN4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
GPN1Q9HCN4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GPN1Q9HCN4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
GPN1Q9HCN4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
GPN1Q9HCN4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.38■■□□□ 1.01
GPN1Q9HCN4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.38■■□□□ 1.01
GPN1Q9HCN4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GPN1Q9HCN4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.38■■□□□ 1.01
GPN1Q9HCN4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.37■■□□□ 1.01
GPN1Q9HCN4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GPN1Q9HCN4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.37■■□□□ 1.01
GPN1Q9HCN4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.37■■□□□ 1.01
GPN1Q9HCN4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.37■■□□□ 1.01
GPN1Q9HCN4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.37■■□□□ 1.01
GPN1Q9HCN4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
GPN1Q9HCN4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.36■■□□□ 1.01
GPN1Q9HCN4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GPN1Q9HCN4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GPN1Q9HCN4 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC21.35■■□□□ 1.01
GPN1Q9HCN4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GPN1Q9HCN4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
GPN1Q9HCN4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
GPN1Q9HCN4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GPN1Q9HCN4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC21.33■■□□□ 1.01
GPN1Q9HCN4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.33■■□□□ 1
GPN1Q9HCN4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
GPN1Q9HCN4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
GPN1Q9HCN4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
GPN1Q9HCN4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
GPN1Q9HCN4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
GPN1Q9HCN4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GPN1Q9HCN4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.32■■□□□ 1
GPN1Q9HCN4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.32■■□□□ 1
GPN1Q9HCN4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
GPN1Q9HCN4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.31■■□□□ 1
GPN1Q9HCN4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.31■■□□□ 1
GPN1Q9HCN4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.3■■□□□ 1
GPN1Q9HCN4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.3■■□□□ 1
GPN1Q9HCN4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GPN1Q9HCN4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms