Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.43■■□□□ 1.82
BRD9Q9H8M2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.43■■□□□ 1.82
BRD9Q9H8M2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.43■■□□□ 1.82
BRD9Q9H8M2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
BRD9Q9H8M2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
BRD9Q9H8M2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
BRD9Q9H8M2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
BRD9Q9H8M2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.41■■□□□ 1.82
BRD9Q9H8M2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
BRD9Q9H8M2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.41■■□□□ 1.82
BRD9Q9H8M2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
BRD9Q9H8M2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.4■■□□□ 1.82
BRD9Q9H8M2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
BRD9Q9H8M2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
BRD9Q9H8M2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.39■■□□□ 1.82
BRD9Q9H8M2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
BRD9Q9H8M2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
BRD9Q9H8M2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
BRD9Q9H8M2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.39■■□□□ 1.82
BRD9Q9H8M2 AL033527.3-201ENST00000566366 1196 ntBASIC26.38■■□□□ 1.81
BRD9Q9H8M2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
BRD9Q9H8M2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
BRD9Q9H8M2 U85056.1-201ENST00000616429 682 ntBASIC26.37■■□□□ 1.81
BRD9Q9H8M2 MIR219A2-201ENST00000608502 1504 ntBASIC26.37■■□□□ 1.81
BRD9Q9H8M2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
BRD9Q9H8M2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.36■■□□□ 1.81
BRD9Q9H8M2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
BRD9Q9H8M2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
BRD9Q9H8M2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
BRD9Q9H8M2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
BRD9Q9H8M2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
BRD9Q9H8M2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
BRD9Q9H8M2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
BRD9Q9H8M2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.34■■□□□ 1.81
BRD9Q9H8M2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
BRD9Q9H8M2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
BRD9Q9H8M2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
BRD9Q9H8M2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.34■■□□□ 1.81
BRD9Q9H8M2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
BRD9Q9H8M2 AC018358.1-201ENST00000631079 1402 ntBASIC26.33■■□□□ 1.81
BRD9Q9H8M2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
BRD9Q9H8M2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
BRD9Q9H8M2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.32■■□□□ 1.8
BRD9Q9H8M2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
BRD9Q9H8M2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.32■■□□□ 1.8
BRD9Q9H8M2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
BRD9Q9H8M2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
BRD9Q9H8M2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
BRD9Q9H8M2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
BRD9Q9H8M2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
BRD9Q9H8M2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
BRD9Q9H8M2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.3■■□□□ 1.8
BRD9Q9H8M2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
BRD9Q9H8M2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
BRD9Q9H8M2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.29■■□□□ 1.8
BRD9Q9H8M2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.29■■□□□ 1.8
BRD9Q9H8M2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.28■■□□□ 1.8
BRD9Q9H8M2 ST7-AS1-201ENST00000456775 1889 ntBASIC26.28■■□□□ 1.8
BRD9Q9H8M2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
BRD9Q9H8M2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
BRD9Q9H8M2 AC092296.2-201ENST00000589470 999 ntBASIC26.28■■□□□ 1.8
BRD9Q9H8M2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.28■■□□□ 1.8
BRD9Q9H8M2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
BRD9Q9H8M2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.27■■□□□ 1.8
BRD9Q9H8M2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
BRD9Q9H8M2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
BRD9Q9H8M2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
BRD9Q9H8M2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
BRD9Q9H8M2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
BRD9Q9H8M2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
BRD9Q9H8M2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
BRD9Q9H8M2 AC126177.7-201ENST00000547904 679 ntBASIC26.25■■□□□ 1.79
BRD9Q9H8M2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
BRD9Q9H8M2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
BRD9Q9H8M2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
BRD9Q9H8M2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
BRD9Q9H8M2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
BRD9Q9H8M2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
BRD9Q9H8M2 ECEL1P2-201ENST00000461596 1295 ntBASIC26.24■■□□□ 1.79
BRD9Q9H8M2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.79
BRD9Q9H8M2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
BRD9Q9H8M2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
BRD9Q9H8M2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
BRD9Q9H8M2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.23■■□□□ 1.79
BRD9Q9H8M2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.23■■□□□ 1.79
BRD9Q9H8M2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
BRD9Q9H8M2 TSPY13P-201ENST00000338964 914 ntBASIC26.22■■□□□ 1.79
BRD9Q9H8M2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.22■■□□□ 1.79
BRD9Q9H8M2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
BRD9Q9H8M2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
BRD9Q9H8M2 KRT18P60-201ENST00000312876 1297 ntBASIC26.21■■□□□ 1.79
BRD9Q9H8M2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
BRD9Q9H8M2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
BRD9Q9H8M2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.21■■□□□ 1.79
BRD9Q9H8M2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
BRD9Q9H8M2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
BRD9Q9H8M2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
BRD9Q9H8M2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
BRD9Q9H8M2 AC004987.1-201ENST00000428627 508 ntBASIC26.19■■□□□ 1.78
BRD9Q9H8M2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms