Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.83■■□□□ 1.89
CALR3Q96L12 AC108673.1-201ENST00000510422 1159 ntBASIC26.83■■□□□ 1.89
CALR3Q96L12 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CALR3Q96L12 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CALR3Q96L12 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
CALR3Q96L12 AC135983.2-203ENST00000454486 1613 ntBASIC26.82■■□□□ 1.88
CALR3Q96L12 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CALR3Q96L12 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CALR3Q96L12 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.8■■□□□ 1.88
CALR3Q96L12 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CALR3Q96L12 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.8■■□□□ 1.88
CALR3Q96L12 AC018358.1-201ENST00000631079 1402 ntBASIC26.8■■□□□ 1.88
CALR3Q96L12 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CALR3Q96L12 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.79■■□□□ 1.88
CALR3Q96L12 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.79■■□□□ 1.88
CALR3Q96L12 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.79■■□□□ 1.88
CALR3Q96L12 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CALR3Q96L12 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.77■■□□□ 1.88
CALR3Q96L12 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
CALR3Q96L12 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.77■■□□□ 1.88
CALR3Q96L12 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CALR3Q96L12 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.88
CALR3Q96L12 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CALR3Q96L12 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CALR3Q96L12 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CALR3Q96L12 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CALR3Q96L12 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CALR3Q96L12 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.75■■□□□ 1.87
CALR3Q96L12 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CALR3Q96L12 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.75■■□□□ 1.87
CALR3Q96L12 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CALR3Q96L12 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
CALR3Q96L12 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CALR3Q96L12 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CALR3Q96L12 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.74■■□□□ 1.87
CALR3Q96L12 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
CALR3Q96L12 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
CALR3Q96L12 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.73■■□□□ 1.87
CALR3Q96L12 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CALR3Q96L12 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CALR3Q96L12 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.73■■□□□ 1.87
CALR3Q96L12 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
CALR3Q96L12 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CALR3Q96L12 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CALR3Q96L12 LINC00273-201ENST00000539813 1452 ntBASIC26.72■■□□□ 1.87
CALR3Q96L12 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CALR3Q96L12 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CALR3Q96L12 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CALR3Q96L12 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
CALR3Q96L12 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.71■■□□□ 1.87
CALR3Q96L12 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CALR3Q96L12 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CALR3Q96L12 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
CALR3Q96L12 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
CALR3Q96L12 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
CALR3Q96L12 SUZ12P1-203ENST00000578195 985 ntBASIC26.7■■□□□ 1.86
CALR3Q96L12 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CALR3Q96L12 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.7■■□□□ 1.86
CALR3Q96L12 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
CALR3Q96L12 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.69■■□□□ 1.86
CALR3Q96L12 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.69■■□□□ 1.86
CALR3Q96L12 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CALR3Q96L12 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CALR3Q96L12 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CALR3Q96L12 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
CALR3Q96L12 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CALR3Q96L12 WHAMMP2-203ENST00000563942 1603 ntBASIC26.67■■□□□ 1.86
CALR3Q96L12 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
CALR3Q96L12 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CALR3Q96L12 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CALR3Q96L12 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CALR3Q96L12 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.65■■□□□ 1.86
CALR3Q96L12 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CALR3Q96L12 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CALR3Q96L12 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
CALR3Q96L12 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CALR3Q96L12 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.63■■□□□ 1.85
CALR3Q96L12 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.63■■□□□ 1.85
CALR3Q96L12 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
CALR3Q96L12 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
CALR3Q96L12 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CALR3Q96L12 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
CALR3Q96L12 MIR6090-201ENST00000622481 60 ntBASIC26.62■■□□□ 1.85
CALR3Q96L12 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.61■■□□□ 1.85
CALR3Q96L12 MIR3665-201ENST00000578708 105 ntBASIC26.61■■□□□ 1.85
CALR3Q96L12 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
CALR3Q96L12 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CALR3Q96L12 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CALR3Q96L12 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CALR3Q96L12 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CALR3Q96L12 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CALR3Q96L12 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
CALR3Q96L12 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CALR3Q96L12 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.58■■□□□ 1.85
CALR3Q96L12 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.58■■□□□ 1.85
CALR3Q96L12 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
CALR3Q96L12 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CALR3Q96L12 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.58■■□□□ 1.84
CALR3Q96L12 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
CALR3Q96L12 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms