Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
SPTSSBQ8NFR3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SPTSSBQ8NFR3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SPTSSBQ8NFR3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SPTSSBQ8NFR3 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSBQ8NFR3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSBQ8NFR3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSBQ8NFR3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SPTSSBQ8NFR3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSBQ8NFR3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSBQ8NFR3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.07□□□□□ -0.16
SPTSSBQ8NFR3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSBQ8NFR3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSBQ8NFR3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SPTSSBQ8NFR3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPTSSBQ8NFR3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSBQ8NFR3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSBQ8NFR3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSBQ8NFR3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSBQ8NFR3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSBQ8NFR3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSBQ8NFR3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSBQ8NFR3 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSBQ8NFR3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSBQ8NFR3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPTSSBQ8NFR3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC14.05□□□□□ -0.16
SPTSSBQ8NFR3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSBQ8NFR3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSBQ8NFR3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSBQ8NFR3 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPTSSBQ8NFR3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPTSSBQ8NFR3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SPTSSBQ8NFR3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSBQ8NFR3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSBQ8NFR3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SPTSSBQ8NFR3 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSBQ8NFR3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SPTSSBQ8NFR3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSBQ8NFR3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSBQ8NFR3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSBQ8NFR3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.03□□□□□ -0.16
SPTSSBQ8NFR3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SPTSSBQ8NFR3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPTSSBQ8NFR3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC14.02□□□□□ -0.16
SPTSSBQ8NFR3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
SPTSSBQ8NFR3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPTSSBQ8NFR3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPTSSBQ8NFR3 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SPTSSBQ8NFR3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPTSSBQ8NFR3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC14.01□□□□□ -0.17
SPTSSBQ8NFR3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.01□□□□□ -0.17
SPTSSBQ8NFR3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC14.01□□□□□ -0.17
SPTSSBQ8NFR3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPTSSBQ8NFR3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPTSSBQ8NFR3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
SPTSSBQ8NFR3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14□□□□□ -0.17
SPTSSBQ8NFR3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPTSSBQ8NFR3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SPTSSBQ8NFR3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SPTSSBQ8NFR3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPTSSBQ8NFR3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTSSBQ8NFR3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTSSBQ8NFR3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPTSSBQ8NFR3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTSSBQ8NFR3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPTSSBQ8NFR3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC13.99□□□□□ -0.17
SPTSSBQ8NFR3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPTSSBQ8NFR3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPTSSBQ8NFR3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTSSBQ8NFR3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SPTSSBQ8NFR3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTSSBQ8NFR3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTSSBQ8NFR3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTSSBQ8NFR3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC13.98□□□□□ -0.17
SPTSSBQ8NFR3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTSSBQ8NFR3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTSSBQ8NFR3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTSSBQ8NFR3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
SPTSSBQ8NFR3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTSSBQ8NFR3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SPTSSBQ8NFR3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
SPTSSBQ8NFR3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTSSBQ8NFR3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTSSBQ8NFR3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPTSSBQ8NFR3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTSSBQ8NFR3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.97□□□□□ -0.17
SPTSSBQ8NFR3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPTSSBQ8NFR3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
SPTSSBQ8NFR3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms