Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00311Q8N616 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.7■□□□□ 0.9
LINC00311Q8N616 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00311Q8N616 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00311Q8N616 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00311Q8N616 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00311Q8N616 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00311Q8N616 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
LINC00311Q8N616 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00311Q8N616 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
LINC00311Q8N616 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00311Q8N616 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00311Q8N616 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00311Q8N616 BX255925.1-201ENST00000566954 1854 ntBASIC20.67■□□□□ 0.9
LINC00311Q8N616 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.67■□□□□ 0.9
LINC00311Q8N616 LINC01971-201ENST00000617888 1048 ntBASIC20.67■□□□□ 0.9
LINC00311Q8N616 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00311Q8N616 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00311Q8N616 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00311Q8N616 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00311Q8N616 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.66■□□□□ 0.9
LINC00311Q8N616 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00311Q8N616 AC018358.1-201ENST00000631079 1402 ntBASIC20.66■□□□□ 0.9
LINC00311Q8N616 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00311Q8N616 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.65■□□□□ 0.9
LINC00311Q8N616 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00311Q8N616 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LINC00311Q8N616 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.65■□□□□ 0.9
LINC00311Q8N616 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.65■□□□□ 0.9
LINC00311Q8N616 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00311Q8N616 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00311Q8N616 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00311Q8N616 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.64■□□□□ 0.89
LINC00311Q8N616 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.64■□□□□ 0.89
LINC00311Q8N616 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.64■□□□□ 0.89
LINC00311Q8N616 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00311Q8N616 LINC01003-201ENST00000564834 1764 ntBASIC20.64■□□□□ 0.89
LINC00311Q8N616 AC110285.7-201ENST00000624417 1536 ntBASIC20.63■□□□□ 0.89
LINC00311Q8N616 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.63■□□□□ 0.89
LINC00311Q8N616 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00311Q8N616 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00311Q8N616 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00311Q8N616 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.61■□□□□ 0.89
LINC00311Q8N616 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.61■□□□□ 0.89
LINC00311Q8N616 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINC00311Q8N616 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LINC00311Q8N616 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LINC00311Q8N616 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.6■□□□□ 0.89
LINC00311Q8N616 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LINC00311Q8N616 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.6■□□□□ 0.89
LINC00311Q8N616 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.6■□□□□ 0.89
LINC00311Q8N616 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00311Q8N616 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00311Q8N616 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.59■□□□□ 0.89
LINC00311Q8N616 ZNRF2P2-203ENST00000454624 420 ntBASIC20.58■□□□□ 0.89
LINC00311Q8N616 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC00311Q8N616 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LINC00311Q8N616 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
LINC00311Q8N616 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
LINC00311Q8N616 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
LINC00311Q8N616 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC00311Q8N616 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LINC00311Q8N616 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC00311Q8N616 DUX4L13-201ENST00000554103 1267 ntBASIC20.57■□□□□ 0.88
LINC00311Q8N616 DUX4L15-201ENST00000611059 1267 ntBASIC20.57■□□□□ 0.88
LINC00311Q8N616 DUX4L23-201ENST00000615195 1269 ntBASIC20.57■□□□□ 0.88
LINC00311Q8N616 DUX4L24-201ENST00000617576 1269 ntBASIC20.57■□□□□ 0.88
LINC00311Q8N616 DUX4L22-201ENST00000618238 1269 ntBASIC20.57■□□□□ 0.88
LINC00311Q8N616 DUX4L20-201ENST00000619712 1269 ntBASIC20.57■□□□□ 0.88
LINC00311Q8N616 DUX4L21-201ENST00000622058 1269 ntBASIC20.57■□□□□ 0.88
LINC00311Q8N616 DUX4L10-201ENST00000622460 1267 ntBASIC20.57■□□□□ 0.88
LINC00311Q8N616 DUX4L25-201ENST00000624915 1269 ntBASIC20.57■□□□□ 0.88
LINC00311Q8N616 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LINC00311Q8N616 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC00311Q8N616 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.57■□□□□ 0.88
LINC00311Q8N616 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
LINC00311Q8N616 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00311Q8N616 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00311Q8N616 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00311Q8N616 ABHD17AP4-201ENST00000411545 909 ntBASIC20.55■□□□□ 0.88
LINC00311Q8N616 DUX4L11-201ENST00000611504 1267 ntBASIC20.55■□□□□ 0.88
LINC00311Q8N616 DUX4L12-201ENST00000614593 1267 ntBASIC20.55■□□□□ 0.88
LINC00311Q8N616 DUX4L14-201ENST00000621227 1267 ntBASIC20.55■□□□□ 0.88
LINC00311Q8N616 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LINC00311Q8N616 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.54■□□□□ 0.88
LINC00311Q8N616 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00311Q8N616 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00311Q8N616 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LINC00311Q8N616 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.53■□□□□ 0.88
LINC00311Q8N616 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00311Q8N616 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00311Q8N616 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00311Q8N616 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.52■□□□□ 0.88
LINC00311Q8N616 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00311Q8N616 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00311Q8N616 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00311Q8N616 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00311Q8N616 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00311Q8N616 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00311Q8N616 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms