Protein–RNA interactions for Protein: Q86UP0

CDH24, Cadherin-24, humanhuman

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24Q86UP0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CDH24Q86UP0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
CDH24Q86UP0 DUX4L13-201ENST00000554103 1267 ntBASIC22.88■■□□□ 1.25
CDH24Q86UP0 DUX4L15-201ENST00000611059 1267 ntBASIC22.88■■□□□ 1.25
CDH24Q86UP0 DUX4L23-201ENST00000615195 1269 ntBASIC22.88■■□□□ 1.25
CDH24Q86UP0 DUX4L24-201ENST00000617576 1269 ntBASIC22.88■■□□□ 1.25
CDH24Q86UP0 DUX4L22-201ENST00000618238 1269 ntBASIC22.88■■□□□ 1.25
CDH24Q86UP0 DUX4L20-201ENST00000619712 1269 ntBASIC22.88■■□□□ 1.25
CDH24Q86UP0 DUX4L21-201ENST00000622058 1269 ntBASIC22.88■■□□□ 1.25
CDH24Q86UP0 DUX4L10-201ENST00000622460 1267 ntBASIC22.88■■□□□ 1.25
CDH24Q86UP0 DUX4L25-201ENST00000624915 1269 ntBASIC22.88■■□□□ 1.25
CDH24Q86UP0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDH24Q86UP0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDH24Q86UP0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDH24Q86UP0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CDH24Q86UP0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
CDH24Q86UP0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDH24Q86UP0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDH24Q86UP0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDH24Q86UP0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDH24Q86UP0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDH24Q86UP0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDH24Q86UP0 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.85■■□□□ 1.25
CDH24Q86UP0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDH24Q86UP0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.85■■□□□ 1.25
CDH24Q86UP0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDH24Q86UP0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDH24Q86UP0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDH24Q86UP0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDH24Q86UP0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDH24Q86UP0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDH24Q86UP0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.85■■□□□ 1.25
CDH24Q86UP0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.85■■□□□ 1.25
CDH24Q86UP0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDH24Q86UP0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CDH24Q86UP0 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC22.84■■□□□ 1.25
CDH24Q86UP0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDH24Q86UP0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.84■■□□□ 1.25
CDH24Q86UP0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDH24Q86UP0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.84■■□□□ 1.25
CDH24Q86UP0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.84■■□□□ 1.25
CDH24Q86UP0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDH24Q86UP0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDH24Q86UP0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDH24Q86UP0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.84■■□□□ 1.25
CDH24Q86UP0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.83■■□□□ 1.25
CDH24Q86UP0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDH24Q86UP0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CDH24Q86UP0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDH24Q86UP0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDH24Q86UP0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
CDH24Q86UP0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
CDH24Q86UP0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC22.8■■□□□ 1.24
CDH24Q86UP0 GPX1-201ENST00000419349 1106 ntBASIC22.8■■□□□ 1.24
CDH24Q86UP0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CDH24Q86UP0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.8■■□□□ 1.24
CDH24Q86UP0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.79■■□□□ 1.24
CDH24Q86UP0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CDH24Q86UP0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDH24Q86UP0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
CDH24Q86UP0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
CDH24Q86UP0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CDH24Q86UP0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.77■■□□□ 1.24
CDH24Q86UP0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.77■■□□□ 1.24
CDH24Q86UP0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
CDH24Q86UP0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.77■■□□□ 1.24
CDH24Q86UP0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CDH24Q86UP0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CDH24Q86UP0 RNF126P1-201ENST00000567452 1320 ntBASIC22.77■■□□□ 1.24
CDH24Q86UP0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CDH24Q86UP0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDH24Q86UP0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDH24Q86UP0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDH24Q86UP0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDH24Q86UP0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDH24Q86UP0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
CDH24Q86UP0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDH24Q86UP0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.74■■□□□ 1.23
CDH24Q86UP0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
CDH24Q86UP0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
CDH24Q86UP0 AL135925.1-201ENST00000605920 1701 ntBASIC22.74■■□□□ 1.23
CDH24Q86UP0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CDH24Q86UP0 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.73■■□□□ 1.23
CDH24Q86UP0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDH24Q86UP0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
CDH24Q86UP0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDH24Q86UP0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.72■■□□□ 1.23
CDH24Q86UP0 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDH24Q86UP0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDH24Q86UP0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDH24Q86UP0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDH24Q86UP0 AC012354.3-201ENST00000623734 483 ntBASIC22.72■■□□□ 1.23
CDH24Q86UP0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
CDH24Q86UP0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDH24Q86UP0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDH24Q86UP0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
CDH24Q86UP0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDH24Q86UP0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CDH24Q86UP0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDH24Q86UP0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms