Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF546Q86UE3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF546Q86UE3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF546Q86UE3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF546Q86UE3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
ZNF546Q86UE3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
ZNF546Q86UE3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF546Q86UE3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF546Q86UE3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF546Q86UE3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF546Q86UE3 AC145676.1-201ENST00000514988 2004 ntBASIC21.01■□□□□ 0.95
ZNF546Q86UE3 ZNRF2P1-201ENST00000441407 443 ntBASIC21.01■□□□□ 0.95
ZNF546Q86UE3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF546Q86UE3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF546Q86UE3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.01■□□□□ 0.95
ZNF546Q86UE3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF546Q86UE3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF546Q86UE3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21■□□□□ 0.95
ZNF546Q86UE3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF546Q86UE3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF546Q86UE3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF546Q86UE3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.98■□□□□ 0.95
ZNF546Q86UE3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF546Q86UE3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.98■□□□□ 0.95
ZNF546Q86UE3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF546Q86UE3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.97■□□□□ 0.95
ZNF546Q86UE3 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF546Q86UE3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF546Q86UE3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.96■□□□□ 0.95
ZNF546Q86UE3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
ZNF546Q86UE3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF546Q86UE3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF546Q86UE3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
ZNF546Q86UE3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF546Q86UE3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF546Q86UE3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF546Q86UE3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF546Q86UE3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ZNF546Q86UE3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF546Q86UE3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF546Q86UE3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF546Q86UE3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF546Q86UE3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ZNF546Q86UE3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF546Q86UE3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF546Q86UE3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF546Q86UE3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ZNF546Q86UE3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.93■□□□□ 0.94
ZNF546Q86UE3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF546Q86UE3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF546Q86UE3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF546Q86UE3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF546Q86UE3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.92■□□□□ 0.94
ZNF546Q86UE3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF546Q86UE3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ZNF546Q86UE3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF546Q86UE3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.91■□□□□ 0.94
ZNF546Q86UE3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF546Q86UE3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF546Q86UE3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.9■□□□□ 0.94
ZNF546Q86UE3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF546Q86UE3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF546Q86UE3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
ZNF546Q86UE3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.89■□□□□ 0.94
ZNF546Q86UE3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZNF546Q86UE3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
ZNF546Q86UE3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.89■□□□□ 0.93
ZNF546Q86UE3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF546Q86UE3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF546Q86UE3 AP004833.2-201ENST00000532228 1454 ntBASIC20.88■□□□□ 0.93
ZNF546Q86UE3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF546Q86UE3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF546Q86UE3 DYNLL1-208ENST00000550178 581 ntBASIC20.88■□□□□ 0.93
ZNF546Q86UE3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF546Q86UE3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF546Q86UE3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF546Q86UE3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.87■□□□□ 0.93
ZNF546Q86UE3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF546Q86UE3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.87■□□□□ 0.93
ZNF546Q86UE3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF546Q86UE3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF546Q86UE3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.86■□□□□ 0.93
ZNF546Q86UE3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF546Q86UE3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF546Q86UE3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF546Q86UE3 AC010864.1-201ENST00000609407 1511 ntBASIC20.85■□□□□ 0.93
ZNF546Q86UE3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF546Q86UE3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF546Q86UE3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms