Protein–RNA interactions for Protein: Q7Z404

TMC4, Transmembrane channel-like protein 4, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4Q7Z404 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
TMC4Q7Z404 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
TMC4Q7Z404 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
TMC4Q7Z404 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
TMC4Q7Z404 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
TMC4Q7Z404 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.51■■■□□ 2.64
TMC4Q7Z404 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TMC4Q7Z404 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.51■■■□□ 2.63
TMC4Q7Z404 U85056.1-201ENST00000616429 682 ntBASIC31.51■■■□□ 2.63
TMC4Q7Z404 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TMC4Q7Z404 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TMC4Q7Z404 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
TMC4Q7Z404 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
TMC4Q7Z404 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
TMC4Q7Z404 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.5■■■□□ 2.63
TMC4Q7Z404 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
TMC4Q7Z404 ECEL1P2-201ENST00000461596 1295 ntBASIC31.49■■■□□ 2.63
TMC4Q7Z404 AC126177.7-201ENST00000547904 679 ntBASIC31.49■■■□□ 2.63
TMC4Q7Z404 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC31.48■■■□□ 2.63
TMC4Q7Z404 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
TMC4Q7Z404 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
TMC4Q7Z404 AC018358.1-201ENST00000631079 1402 ntBASIC31.48■■■□□ 2.63
TMC4Q7Z404 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
TMC4Q7Z404 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TMC4Q7Z404 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
TMC4Q7Z404 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TMC4Q7Z404 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.46■■■□□ 2.63
TMC4Q7Z404 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TMC4Q7Z404 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC31.46■■■□□ 2.63
TMC4Q7Z404 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TMC4Q7Z404 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
TMC4Q7Z404 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TMC4Q7Z404 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TMC4Q7Z404 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
TMC4Q7Z404 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TMC4Q7Z404 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.43■■■□□ 2.62
TMC4Q7Z404 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
TMC4Q7Z404 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
TMC4Q7Z404 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.43■■■□□ 2.62
TMC4Q7Z404 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TMC4Q7Z404 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC31.42■■■□□ 2.62
TMC4Q7Z404 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
TMC4Q7Z404 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
TMC4Q7Z404 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
TMC4Q7Z404 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
TMC4Q7Z404 AL033527.3-201ENST00000566366 1196 ntBASIC31.41■■■□□ 2.62
TMC4Q7Z404 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TMC4Q7Z404 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TMC4Q7Z404 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
TMC4Q7Z404 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
TMC4Q7Z404 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
TMC4Q7Z404 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.39■■■□□ 2.62
TMC4Q7Z404 AP004833.2-201ENST00000532228 1454 ntBASIC31.39■■■□□ 2.62
TMC4Q7Z404 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
TMC4Q7Z404 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC31.38■■■□□ 2.61
TMC4Q7Z404 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TMC4Q7Z404 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.37■■■□□ 2.61
TMC4Q7Z404 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
TMC4Q7Z404 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.37■■■□□ 2.61
TMC4Q7Z404 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
TMC4Q7Z404 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.35■■■□□ 2.61
TMC4Q7Z404 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TMC4Q7Z404 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.35■■■□□ 2.61
TMC4Q7Z404 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TMC4Q7Z404 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.35■■■□□ 2.61
TMC4Q7Z404 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
TMC4Q7Z404 KRT18P60-201ENST00000312876 1297 ntBASIC31.34■■■□□ 2.61
TMC4Q7Z404 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.34■■■□□ 2.61
TMC4Q7Z404 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TMC4Q7Z404 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
TMC4Q7Z404 TSPY13P-201ENST00000338964 914 ntBASIC31.33■■■□□ 2.61
TMC4Q7Z404 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TMC4Q7Z404 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
TMC4Q7Z404 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.32■■■□□ 2.6
TMC4Q7Z404 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TMC4Q7Z404 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
TMC4Q7Z404 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TMC4Q7Z404 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TMC4Q7Z404 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.3■■■□□ 2.6
TMC4Q7Z404 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TMC4Q7Z404 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
TMC4Q7Z404 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TMC4Q7Z404 AL157400.5-201ENST00000507624 621 ntBASIC31.29■■■□□ 2.6
TMC4Q7Z404 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.29■■■□□ 2.6
TMC4Q7Z404 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
TMC4Q7Z404 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
TMC4Q7Z404 AC004987.1-201ENST00000428627 508 ntBASIC31.28■■■□□ 2.6
TMC4Q7Z404 ATP5G2P3-201ENST00000429083 425 ntBASIC31.28■■■□□ 2.6
TMC4Q7Z404 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.28■■■□□ 2.6
TMC4Q7Z404 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TMC4Q7Z404 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
TMC4Q7Z404 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.27■■■□□ 2.6
TMC4Q7Z404 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.26■■■□□ 2.59
TMC4Q7Z404 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
TMC4Q7Z404 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.26■■■□□ 2.59
TMC4Q7Z404 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.26■■■□□ 2.59
TMC4Q7Z404 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
TMC4Q7Z404 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
TMC4Q7Z404 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
TMC4Q7Z404 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.25■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms