Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.85■■□□□ 1.41
RPP38P78345 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
RPP38P78345 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.85■■□□□ 1.41
RPP38P78345 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
RPP38P78345 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RPP38P78345 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.84■■□□□ 1.41
RPP38P78345 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RPP38P78345 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RPP38P78345 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.83■■□□□ 1.41
RPP38P78345 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.83■■□□□ 1.41
RPP38P78345 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RPP38P78345 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
RPP38P78345 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RPP38P78345 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RPP38P78345 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.83■■□□□ 1.41
RPP38P78345 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.83■■□□□ 1.41
RPP38P78345 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RPP38P78345 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.82■■□□□ 1.4
RPP38P78345 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RPP38P78345 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPP38P78345 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RPP38P78345 AC127502.1-201ENST00000399971 1502 ntBASIC23.8■■□□□ 1.4
RPP38P78345 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RPP38P78345 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RPP38P78345 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RPP38P78345 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RPP38P78345 MIR7108-201ENST00000614319 87 ntBASIC23.8■■□□□ 1.4
RPP38P78345 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.8■■□□□ 1.4
RPP38P78345 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RPP38P78345 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.8■■□□□ 1.4
RPP38P78345 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.8■■□□□ 1.4
RPP38P78345 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.79■■□□□ 1.4
RPP38P78345 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.79■■□□□ 1.4
RPP38P78345 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RPP38P78345 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.78■■□□□ 1.4
RPP38P78345 LINC01971-201ENST00000617888 1048 ntBASIC23.78■■□□□ 1.4
RPP38P78345 LINC00273-201ENST00000539813 1452 ntBASIC23.78■■□□□ 1.4
RPP38P78345 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RPP38P78345 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RPP38P78345 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.77■■□□□ 1.4
RPP38P78345 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.76■■□□□ 1.39
RPP38P78345 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RPP38P78345 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.76■■□□□ 1.39
RPP38P78345 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RPP38P78345 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RPP38P78345 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
RPP38P78345 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.75■■□□□ 1.39
RPP38P78345 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RPP38P78345 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
RPP38P78345 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.74■■□□□ 1.39
RPP38P78345 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.74■■□□□ 1.39
RPP38P78345 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RPP38P78345 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.73■■□□□ 1.39
RPP38P78345 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RPP38P78345 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.73■■□□□ 1.39
RPP38P78345 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RPP38P78345 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RPP38P78345 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RPP38P78345 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RPP38P78345 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
RPP38P78345 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
RPP38P78345 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RPP38P78345 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RPP38P78345 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RPP38P78345 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
RPP38P78345 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
RPP38P78345 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.7■■□□□ 1.38
RPP38P78345 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RPP38P78345 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RPP38P78345 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.69■■□□□ 1.38
RPP38P78345 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RPP38P78345 BX255925.1-201ENST00000566954 1854 ntBASIC23.68■■□□□ 1.38
RPP38P78345 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.68■■□□□ 1.38
RPP38P78345 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.68■■□□□ 1.38
RPP38P78345 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
RPP38P78345 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RPP38P78345 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RPP38P78345 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RPP38P78345 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.67■■□□□ 1.38
RPP38P78345 DUX4L11-201ENST00000611504 1267 ntBASIC23.67■■□□□ 1.38
RPP38P78345 DUX4L12-201ENST00000614593 1267 ntBASIC23.67■■□□□ 1.38
RPP38P78345 DUX4L14-201ENST00000621227 1267 ntBASIC23.67■■□□□ 1.38
RPP38P78345 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RPP38P78345 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RPP38P78345 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
RPP38P78345 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.66■■□□□ 1.38
RPP38P78345 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.66■■□□□ 1.38
RPP38P78345 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
RPP38P78345 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.66■■□□□ 1.38
RPP38P78345 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
RPP38P78345 AC135731.1-201ENST00000569415 2548 ntBASIC23.66■■□□□ 1.38
RPP38P78345 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
RPP38P78345 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RPP38P78345 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RPP38P78345 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RPP38P78345 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.65■■□□□ 1.38
RPP38P78345 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.65■■□□□ 1.38
RPP38P78345 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.65■■□□□ 1.38
RPP38P78345 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
RPP38P78345 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms